KEGG   Candidatus Planktophila limnetica: PHILAsVB114_02575
Entry
PHILAsVB114_02575 CDS       T05067                                 
Name
(GenBank) D-alanine-D-alanine ligase
  KO
K01921  D-alanine-D-alanine ligase [EC:6.3.2.4]
Organism
plim  Candidatus Planktophila limnetica
Pathway
plim00470  D-Amino acid metabolism
plim00550  Peptidoglycan biosynthesis
plim01100  Metabolic pathways
plim01502  Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:plim00001]
 09100 Metabolism
  09106 Metabolism of other amino acids
   00470 D-Amino acid metabolism
    PHILAsVB114_02575
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PHILAsVB114_02575
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    PHILAsVB114_02575
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:plim01011]
    PHILAsVB114_02575
Enzymes [BR:plim01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.4  D-alanine---D-alanine ligase
     PHILAsVB114_02575
Peptidoglycan biosynthesis and degradation proteins [BR:plim01011]
 Precursor biosynthesis
  Amino acid ligase
   PHILAsVB114_02575
SSDB
Motif
Pfam: Dala_Dala_lig_C Dala_Dala_lig_N ATP-grasp CPSase_L_D2 ATP-grasp_4 ATP-grasp_3
Other DBs
NCBI-ProteinID: ASY27547
UniProt: A0A249LEX2
Position
478616..479683
AA seq 355 aa
MKKVIAIIFGGRSSEHEISCVSAGGVLAALDRSKYEPILIGITRSGSWVHVQEDFPLEIR
GGVLPEVPTDAPQVVADIHGLSVDKKPLHVDVIFPLLHGPYGEDGTIQGFCEMANIAYVG
SGVLASAVAMDKSFAKPIFASHGMSVVPGFVVKKSEWKSLRAQFEKSAVSLEYPLFVKPA
RGGSSRGTTKVKSEKDFAAAIDEAHTFDSKALVEKAIHGIEVECAVLEINGSPEASIVGS
ISIDPKFEFYDFEAKYLDGATKIELPALIPSDVAEEIRAKAIQAFKALGCSGLARVDFFY
ATTGEVFINELNTMPGFTQTSVFPKMWAATGKNYESIIEELIKTAQQRTNGVLEN
NT seq 1068 nt   +upstreamnt  +downstreamnt
atgaaaaaagtaattgcaattattttcggtggccgctccagcgaacatgaaatttcctgt
gtttctgccggtggagttttagccgcccttgatagaagtaaatatgaaccaatactgatc
ggcatcactcgaagcggttcgtgggttcatgttcaagaagattttcctttagaaattcga
gggggagtattacctgaagttccaactgatgcccctcaagttgttgcagacatacatgga
cttagtgttgataaaaaaccattacatgttgatgttatttttccactattgcatggacca
tacggtgaagatggaaccatccaaggtttctgcgaaatggccaatattgcctatgttgga
agcggtgttcttgcaagcgcggttgcgatggataaatcatttgcaaagccaatttttgca
tcccatgggatgagtgttgttccaggctttgttgtgaaaaagagtgagtggaaatcactg
cgtgctcaattcgaaaagagcgcagtatcattggagtatccactctttgtaaaacccgct
cgtggcggttcaagtcgtggaacaacaaaagtaaagtcagaaaaagacttcgctgcagcc
attgatgaagcgcacacatttgactccaaagccttggttgaaaaggcaattcacggcatt
gaagttgaatgcgctgttcttgaaattaacgggtcaccagaggcatcaatagtggggtcc
atttcaatagatccaaagtttgagttctacgattttgaagctaaatatttagatggtgct
acaaaaattgagctaccagccctgattcctagcgatgttgccgaagagattagagccaaa
gcgattcaagcattcaaagccttgggttgttcaggattagcacgtgtggatttcttctat
gcaacaacaggtgaagtatttatcaatgaactcaatacgatgccaggctttacgcaaacc
tcagtatttccaaaaatgtgggcagcaaccggtaagaactatgaaagtattattgaagag
ttaataaaaacagcacagcaaagaaccaatggtgttttagaaaattag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Chemical substance (5)   
   KEGG COMPOUND (5)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (25)   

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