KEGG   Plantactinospora sp. KBS50: CIK06_04520
Entry
CIK06_04520       CDS       T05048                                 
Symbol
groL
Name
(GenBank) chaperonin GroEL
  KO
K04077  chaperonin GroEL [EC:5.6.1.7]
Organism
plk  Plantactinospora sp. KBS50
Pathway
plk03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:plk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CIK06_04520 (groL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:plk03019]
    CIK06_04520 (groL)
   03110 Chaperones and folding catalysts [BR:plk03110]
    CIK06_04520 (groL)
   03029 Mitochondrial biogenesis [BR:plk03029]
    CIK06_04520 (groL)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:plk04147]
    CIK06_04520 (groL)
Enzymes [BR:plk01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.1  Enzymes altering polypeptide conformation or assembly
    5.6.1.7  chaperonin ATPase
     CIK06_04520 (groL)
Messenger RNA biogenesis [BR:plk03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CIK06_04520 (groL)
Chaperones and folding catalysts [BR:plk03110]
 Heat shock proteins
  HSP60 / Chaperonin
   CIK06_04520 (groL)
Mitochondrial biogenesis [BR:plk03029]
 Mitochondrial protein import machinery
  Matrix
   Other matrix factors
    CIK06_04520 (groL)
Exosome [BR:plk04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   CIK06_04520 (groL)
  Exosomal proteins of other body fluids (saliva and urine)
   CIK06_04520 (groL)
  Exosomal proteins of breast cancer cells
   CIK06_04520 (groL)
  Exosomal proteins of colorectal cancer cells
   CIK06_04520 (groL)
  Exosomal proteins of bladder cancer cells
   CIK06_04520 (groL)
SSDB
Motif
Pfam: Cpn60_TCP1 UreE_C
Other DBs
NCBI-ProteinID: ASW53611
UniProt: A0A248YJ24
Position
964041..965687
AA seq 548 aa
MAKILSFSDDARHLLEHGVNALADTVKVTLGPRGRNVVLDKKFGAPTITNDGVTIAKEIE
LTNPYENLGAQLVKEVATKTNDVAGDGTTTATVLAQAMVREGLRNVAAGANPTGLKRGID
AAANKVSDALLGKAVEVGGKESVAHVATISAQDATIGEMIAEAMEKVGRDGVITVEEGST
LATELEVTEGLQFDKGFISPNFVTDSESQEAVLDDPYILITTQKISAIEELLPLLEKILS
DSKPLLIVAEDVEGQALATLVVNSIRKTLKVCAVKAPGFGDRRKAMLQDMAVLTGAELVA
PELGYKLDQVGLEVLGGARRVVVDKENTTVIDGKGRDTEVADRIGQIRKEIEASDSDWDR
EKLSERLAKLSGGIAVIKAGAATEVEMKERKHRIEDAISATKAAVEEGTVPGGGAALVQI
AALLEDGLGLTGDEKVGVSIVRKSLLEPLRWIAQNAGQDGYVVVQKVIGADWGTGLNAAT
GEYVDLAAAGILDPVKVTRNAVLNAASIAGLLLTTESLVVEKPAEPEPAAAGGHGHSHGH
GHQHGPGF
NT seq 1647 nt   +upstreamnt  +downstreamnt
atggcgaagatcctgagcttctcggacgacgcccggcacctgctggagcacggtgtcaac
gccctcgcggacacggtcaaggtcaccctcggcccgcgcgggcgcaacgtcgtcctggac
aagaaattcggtgcgcccacgatcaccaacgacggcgtgaccatcgccaaggagatcgag
ctcaccaacccgtacgagaacctcggcgcgcagctggtcaaggaggtggcgaccaagacc
aacgacgtcgccggcgacgggaccaccaccgccaccgtgctggcccaggcgatggtccgg
gagggcctgcgcaacgtggccgcgggcgccaacccgaccggcctcaagcgcggcatcgac
gcggcggccaacaaggtctccgacgccctgctcggcaaggccgtcgaggtgggcggcaag
gagtccgtcgcgcacgtggcgacgatctccgcgcaggacgccaccatcggcgagatgatc
gccgaggcgatggagaaggtcggccgcgacggcgtcatcaccgtcgaggagggctccacg
ctcgccaccgagctggaggtcaccgagggtctccagttcgacaagggcttcatctccccg
aacttcgtcaccgactcggagtcgcaggaggcggtgctcgacgacccgtacatcctgatc
acgacccagaagatctcggcgatcgaggaactgctgccgctgctggagaagatcctctcc
gacagcaagccgctgctgatcgtggccgaggacgtcgagggacaggcgctggccaccctg
gtggtcaactcgatccgcaagaccctgaaggtctgcgcggtgaaggcgcccggcttcggc
gaccggcgcaaggcgatgctgcaggacatggcggtcctgaccggcgccgagctggtcgcc
ccggagctgggctacaagctcgaccaggtgggcctggaggtgctcggcggcgcccggcgg
gtggtggtggacaaggagaacaccaccgtcatcgacggcaagggccgggacaccgaggtc
gccgaccggatcggccagatccgcaaggagatcgaggcctccgactccgactgggaccgg
gagaagctgtccgagcgactggccaagctctccggcggcatcgcggtgatcaaggccggc
gccgccaccgaggtcgagatgaaggagcgcaagcaccgcatcgaggacgccatctcggcg
accaaggccgcggtcgaggagggcacggtgcccggcggtggcgccgcgctcgtgcagatc
gccgccctgctggaggacggcctggggctgaccggtgacgagaaggtgggcgtcagcatc
gtccgcaagtcgctgctcgaaccgctgcggtggatcgcgcagaacgccggccaggacggg
tacgtcgtggtgcagaaggtcatcggtgccgactggggcaccggcctgaacgccgcgacc
ggcgagtacgtcgacctggccgccgccggcatcctcgacccggtcaaggtcacccgcaac
gcggtgctgaacgccgcctccatcgccggcctgctgctcaccacggagagcctggtcgtg
gagaagccggccgagccggagccggccgcggccggtgggcacggccactcgcacggccac
ggccaccagcacggcccgggcttctga

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Ontology (6)   
   KEGG BRITE (6)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (23)   

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