KEGG   Planctopirus limnophila: Plim_0694
Entry
Plim_0694         CDS       T01225                                 
Name
(GenBank) recombination protein RecR
  KO
K06187  recombination protein RecR
Organism
plm  Planctopirus limnophila
Pathway
plm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:plm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Plim_0694
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plm03400]
    Plim_0694
DNA repair and recombination proteins [BR:plm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     Plim_0694
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      Plim_0694
SSDB
Motif
Pfam: Toprim_4 RecR_HhH Toprim RecR_ZnF HHH_5 HHH
Other DBs
NCBI-ProteinID: ADG66541
UniProt: D5SRK7
Position
912941..913564
AA seq 207 aa
MPRAIEPNHHAYGRHVGLLVQQLAALPGIGQKSAERLAQHLLDCSEEEAAALAHAILDVR
RTIRRCSVCHNLTEQETCDICLDSRRDQGLVCIVEQPRDLLALEATGTFGGVYHVLGGRI
APLSGVGPDDLNLATLIRRVKAGKIRELVMATNPTLEGDGTALYIVNLLADEPVKITRLA
RGIATGSVLEFANREMLSDALKGRQSF
NT seq 624 nt   +upstreamnt  +downstreamnt
atgccccgtgccattgaaccgaatcatcatgcgtatggccgacatgtcggtctgcttgtt
cagcaactggcggctctcccggggattgggcagaagtcggcggagcggctggcacagcat
cttctcgattgctctgaggaagaagcggctgctcttgcccatgccattctggatgttcgc
cgcacaattcgtcgatgttcggtctgccacaatctgactgagcaggaaacttgcgacatc
tgcctcgattcaaggcgggatcagggattggtctgcattgtggagcaacctcgagacctt
ctggcgctggaggccaccggaacctttgggggcgtctaccatgtgctcggtggccgcatt
gcaccactgagtggtgtgggccccgatgatttgaacctcgccacgctcatccgccgtgtt
aaagccgggaagattcgcgaactggtaatggccacgaatcccactctcgaaggggatgga
accgccctgtacatagtgaatcttctggccgatgaaccggtcaaaatcactcgtctggca
cgcgggatcgccaccggcagtgtactggaatttgccaatcgcgagatgctttcggatgct
ctcaagggccgccagagcttttaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (20)   

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