KEGG   Planctopirus limnophila: Plim_0735
Entry
Plim_0735         CDS       T01225                                 
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
  KO
K14441  ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]
Organism
plm  Planctopirus limnophila
Brite
KEGG Orthology (KO) [BR:plm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:plm03009]
    Plim_0735
Enzymes [BR:plm01000]
 2. Transferases
  2.8  Transferring sulfur-containing groups
   2.8.4  Transferring alkylthio groups
    2.8.4.4  [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
     Plim_0735
Ribosome biogenesis [BR:plm03009]
 Prokaryotic type
  ribosomal protein modification factors
   Plim_0735
SSDB
Motif
Pfam: UPF0004 Radical_SAM TRAM_2
Other DBs
NCBI-ProteinID: ADG66581
UniProt: D5SRP7
Position
956389..957780
AA seq 463 aa
MPQASTGPQTNSKGTYAFVSLGCPKNLVDSERMLGTLSEEGYSLVPNPEGADFVVINTCG
FIDSAREESKSVIREMLQLKSHGGTRGVIVAGCLPERMGGALLQEIPEIDHVMGVFSREE
IGKVADRMVGGAREQREVFRPAPIRAMDDRLRLRVTPKHFAYLKISEGCDRTCTFCAIPK
MRGKHITKPIEMVIQEARELAADGVKELILVAQDTTYYGLDLYGRVRLAELLREVEKVEG
IQWIRLMYLYPIHFTDELIDTIAGSGKILPYLDLPLQHINDTMLRRMQRRTNRAATVELL
DKLQDRIANLTIRTTFITGFPGETDAQFEELCQFVDEGRFARLGAFTYSYEPGTPAVRLP
DHLPEDVKAARRDRLMEIQQPHAFAFADQWIGYELDAVLDRKIDEQTWLGRCFFDAPDID
ANVFVTGENLRAGQMIPVEITARDGYDLRAVAIPNDADLPAGD
NT seq 1392 nt   +upstreamnt  +downstreamnt
ttgccacaagctagtactggcccccaaaccaactcgaaagggacatacgccttcgtcagc
ctgggttgccccaaaaatctcgtcgatagcgaacgtatgctcggtacgctctccgaggaa
ggctactcgctggttcctaatcccgaaggagccgatttcgtcgtcatcaatacttgcggc
ttcatcgacagtgcccgcgaagaatcaaaatcggtcatccgcgaaatgctccaactcaag
tctcacggcggaactcgtggtgtcatcgtcgctggctgtctgccagaacgtatgggtggc
gcactcctgcaggaaatcccggagatcgaccatgtcatgggtgtcttcagccgggaagaa
attggcaaagtcgccgatcgaatggtcggtggagcacgcgaacaacgcgaagttttccgt
ccagcccccatccgggccatggatgaccgattgcgtttaagagtcactcccaaacacttc
gcctatctcaaaatctcagaaggttgtgatcgaacctgtacgttttgtgcgattcctaaa
atgcgtgggaagcacatcactaagccaatcgagatggtcattcaggaagctcgggagctg
gctgcggatggcgtcaaagaactgattcttgtggcccaggatacgacctactatggactc
gatctgtatggtcgagtgcgtctggcagaactgcttcgagaagtggaaaaagtcgagggg
attcagtggatccgcctgatgtacctttacccgattcacttcactgatgaactgatcgat
accattgccggctcaggcaagattctgccttatctcgatctccccttgcagcacattaac
gacacgatgctgcggagaatgcagcgtcgcacgaacagagctgccaccgtggaattactc
gataaactgcaggatcggattgcgaatcttacgatccgtaccaccttcatcacgggtttc
ccgggagagaccgatgcccagtttgaagaactctgccagtttgtcgatgaaggtcgcttt
gccagattaggagcgttcacctattcctatgagccgggaacaccggctgtgcgactcccc
gatcatcttcccgaagatgtcaaagcagcccggcgtgatcgactcatggaaattcagcag
ccgcatgcgtttgcctttgctgatcaatggattggctatgaactcgatgccgtactcgac
cgcaagatcgacgagcagacgtggctcggccgctgctttttcgatgcgccagacatcgac
gcgaatgtcttcgtgactggtgaaaaccttcgcgcaggtcagatgattcccgtcgaaatc
acggctcgcgacggctacgacttgcgggcagtcgcaatcccgaatgacgccgatcttcca
gctggcgattaa

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Ontology (3)   
   KEGG BRITE (3)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (30)   

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