KEGG   Planctopirus limnophila: Plim_2467
Entry
Plim_2467         CDS       T01225                                 
Name
(GenBank) methionine synthase
  KO
K00548  5-methyltetrahydrofolate--homocysteine methyltransferase [EC:2.1.1.13]
Organism
plm  Planctopirus limnophila
Pathway
plm00270  Cysteine and methionine metabolism
plm00450  Selenocompound metabolism
plm00670  One carbon pool by folate
plm01100  Metabolic pathways
plm01110  Biosynthesis of secondary metabolites
plm01230  Biosynthesis of amino acids
plm04980  Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:plm00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00270 Cysteine and methionine metabolism
    Plim_2467
  09106 Metabolism of other amino acids
   00450 Selenocompound metabolism
    Plim_2467
  09108 Metabolism of cofactors and vitamins
   00670 One carbon pool by folate
    Plim_2467
 09150 Organismal Systems
  09154 Digestive system
   04980 Cobalamin transport and metabolism
    Plim_2467
Enzymes [BR:plm01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.13  methionine synthase
     Plim_2467
SSDB
Motif
Pfam: Met_synt_B12 S-methyl_trans Pterin_bind B12-binding_2 B12-binding OKR_DC_1_N
Other DBs
NCBI-ProteinID: ADG68293
UniProt: D5SPE9
Position
complement(3216907..3220692)
AA seq 1261 aa
MVDISRPGLFESLLDDRILILDGAMGSMIHRFEPTEADYRGERFKSHSIDLKNASDVLVL
TQPQMIQSIHRQYLEAGADIIETNTFGATELMLDEFHLGHLTHEMNIAAATLARDVCDEF
TKKNPAKPRFVAGSIGPTKFQLSFNADKPGYRPVTFEQLAASYAGQVRALLDGGVDLLLP
ETSFDTLNMKACLYAIEQVFAERGVRIPVMVSGTIFQGGVTLTGQTMEAFWAAVSHNPMT
SVGLNCALGPKQMRQYVETLANTATRYISCYPNAGMPDGMGGFDSTPSEFSGVIREFAEN
GWVNIVGGCCGTTPEFIHAVANVVKGVAPRKVPHENHWSVYSGSDVLKIPAADAVFDEGQ
SAPNRSFLMIGERTNVTGSKKFARLIREKKYEEALTIAAQQVENGANMIDVNMDEGLLDS
KAEMVHFLNLISDDPAISKVPVMVDSSKFDVIEAGLKCLSGKGVVNSISLKEGEEKFLEH
AGIIRKYGAAVVVMAFDEEGQAADQVNKVRICQRAYKLLTEKAGFPPEDIIFDCNILTVG
TGMEEHANYAVEFIEAVREIKATCPYARTSGGVSNVSFSFRGNEHVREAMNAAFLYHAIN
AGLDMGIVNAGQLAVYDEIEKELLTYVEDVLLNRRPDATERLIAYSEELKARETRTDDSG
PVVEAWRSESVEERLKHALLKGIADFIDEDTEEARLKYSRPLNVIQGPLMDGMNVVGKLF
GEGKMFLPQVVKSARVMKKSVAYLQPFMEAEKEALAASSEAAGETTVAAQPTSTSRGKIL
IATVKGDVHDIGKNIVAVVLRCNNFEVLDLGVMVPCDKILDTAIAEGCQIIGLSGLITPS
LDEMTTVAKEMERRGFKIPLLIGGATTSAKHTAVKIAPHYSAPTVHIVDASLSVPVVENL
LDDERRDEYLKQLAANQQRDRDTYGHLQKRTLVPFEEACRRRFETDWKTVKIDTPDFWGA
KVLDDFPLEKLVPYIDWSPFFMTWELRGKYPKILHDPVVGEEASRVFSDAQKLLDRILKE
KLLQAKGVYGFWPAQADGEDIVLYSPESVAAGKPEIIQRFPMLRQQWERVGQKEFRSLAD
YIAPIESGRMDSLGAFAVTTGIGCDELADEFLHKQHDDYLSIMTKALADRLAEAFAEYLH
HEARQHWGFGKEESLSKEEMIEEKYRGIRPAYGYPACPDHTEKVPLFELLDVEKNTGIKL
TESYAMHPGAAVSGLYFAHPESRYFSVDKVTKDQIEDYARRKEMSVAEIEKWLMPNLGYD
N
NT seq 3786 nt   +upstreamnt  +downstreamnt
atggttgatatttcccgccccggactgtttgagtcgcttctggatgatcgcattctgatt
ctcgacggggcgatgggttcgatgatccatcggttcgagccgactgaggccgattatcgg
ggtgagcgattcaagtcgcactcaatcgacttgaagaatgcctcggatgtgctggtgctg
actcagccccaaatgatccagtcgatccatcggcaatacctcgaagccggtgcagatatc
atcgagaccaatacgtttggtgcgacagaactcatgctcgatgagtttcatctggggcat
ctgactcatgagatgaatatcgcagcggcgaccctggcacgcgatgtctgcgacgagttc
acgaaaaaaaatcctgccaaacctcgatttgtggcaggtagtatcgggccgacgaagttc
cagctttcgttcaatgccgataagccgggttatcggcccgtcacctttgaacaactggcg
gcttcgtacgcagggcaggtgcgggccttgctggatggtggcgtcgatctactgctgccg
gagacatcattcgacacgctgaacatgaaggcttgcctgtatgccatcgaacaggtcttt
gcggaacgcggcgttcgcattcctgtgatggtgagtggcaccattttccagggtggcgtg
acgctcaccgggcagacgatggaggccttctgggcagccgtctcgcacaatcccatgacc
agcgtgggtttgaactgcgcactcggccctaagcagatgcggcagtatgtcgagacgctc
gcgaacactgcgaccagatacatcagttgttatcccaatgcgggcatgcccgacggcatg
gggggctttgattccacacccagcgagttttcgggtgtcattcgcgagttcgctgaaaat
ggctgggtgaatattgtcggtgggtgctgtggcacgacccctgagtttattcacgccgtc
gcaaatgttgtgaagggggtcgctccgcgcaaggtgccccacgagaatcactggtcggtt
tacagcgggtcggatgtcctcaagattccggctgccgatgctgtgttcgacgaaggccag
tcggcaccgaaccgatcgttcctgatgattggtgagcggacgaacgtgacgggttcgaag
aagttcgcccgactcattcgcgaaaaaaaatacgaagaagctctcaccattgctgcccag
caggttgagaacggcgcgaacatgatcgacgtcaacatggacgaaggtctgctcgacagc
aaagcggagatggttcattttctgaatctgatctccgacgatccggcgatcagcaaagtg
ccggtgatggtggacagctcgaagttcgatgtcattgaggcggggttgaaatgtctgtct
ggtaaaggggttgtgaattcgatcagcctcaaagaaggggaagaaaagttcctcgaacat
gccgggatcatccgcaagtacggcgcagcagtcgtggtgatggcgttcgatgaagaaggt
caggcggcggatcaggtgaacaaagtgcggatctgtcagcgggcgtacaagcttttgaca
gagaaggccgggttcccgccggaagatatcatcttcgattgcaatatcctcacggtgggt
acggggatggaagagcatgcgaactatgctgtcgagttcatcgaagccgttcgcgagatc
aaggcgacctgcccttatgcccgaacttccggcggtgtgagtaatgtctcgttctccttc
cgcgggaatgagcatgttcgcgaagcgatgaatgccgccttcctgtatcacgcgatcaat
gccggtctcgatatgggtattgtcaacgccgggcaactggccgtttatgacgagatcgag
aaggagctgttgacctacgtcgaagacgtgctgctgaatcgtcggccagatgcgacggag
cgtttgattgcgtattcggaagaactcaaggcgcgcgaaacacgaacggatgacagtggc
ccggttgtcgaagcgtggcgcagtgaatcggtcgaagagcggctcaagcatgctttgctc
aaagggattgccgactttatcgacgaagataccgaagaagcccgactcaagtatagccga
ccgctgaatgtcattcaggggccgctgatggacggcatgaatgtcgtgggcaagctcttt
ggcgaaggaaagatgtttctgccgcaggtcgtgaagagcgcccgcgtcatgaagaagtct
gtggcctatctgcagccctttatggaagcggagaaagaagctctggctgccagttctgag
gctgccggtgaaacaacagtggcagcacaaccgacatcgacaagccggggcaaaattctg
attgccaccgtgaagggggatgtgcacgacattggcaaaaacattgtggctgtggttttg
cgctgcaataacttcgaagtgctcgatttaggggtgatggttccctgcgataagattctg
gacaccgcgattgcggaaggttgccagattatcggtctgtcgggattgatcacgccatcg
ctggatgaaatgaccactgtcgccaaagaaatggaacggcgcgggttcaagattcccctc
ctgattggtggggcgaccacgagtgcgaagcataccgcagtcaagattgctccccattac
tcggcaccgacagttcatattgtcgatgcctcgctctctgttcctgtcgtcgagaacctg
ctggatgatgagcggcgtgatgaatacttgaaacaattggcagccaatcaacagcgtgat
cgagatacctacgggcatctgcagaagcgcacgctggttccgtttgaagaagcgtgtcgc
cgccggtttgagaccgattggaagaccgtgaagatcgacactcccgacttctggggcgcg
aaagtgctggatgatttcccgctcgagaaactggtgccatacattgactggtcaccgttt
ttcatgacctgggagttacgcgggaaatatccgaaaatcctccatgatccagtcgttggt
gaagaagccagccgggtctttagtgatgcacaaaagctgctcgaccggattctgaaagaa
aaactcctccaggccaagggtgtgtacggtttctggccggcacaggctgatggtgaagat
atcgtgttgtactcgccagagagtgtggcggctggaaaaccagagatcatccaacgcttt
ccgatgctgcgtcagcagtgggaacgagtgggccagaaagaatttcggtcattggcggat
tacatcgcaccgattgaaagtgggcggatggattcgctgggggcttttgctgtgaccaca
gggattggctgtgatgaactcgcggatgaatttctccacaaacagcatgatgactatctt
tcgatcatgacgaaggctttggccgatcgactggccgaagcttttgccgaatatctgcat
catgaagcccgtcaacattggggctttggcaaagaggaatcgctctcgaaagaagagatg
atcgaagaaaagtaccgtgggattcggcctgcctacggctatcccgcctgtccggatcat
acggaaaaagttccgctgttcgaactgctggatgttgagaaaaatacaggcatcaagttg
acggaaagctatgcgatgcacccgggggcggctgtgagcggtttgtatttcgctcatcca
gaatcccgctacttctcggtcgataaagtgaccaaagatcaaattgaagactatgcacga
cgcaaagagatgtcggttgcagaaatcgaaaaatggctcatgcccaaccttggctacgac
aactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (8)   
   KEGG PATHWAY (7)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (3)   
   KEGG ENZYME (1)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (52)   

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