KEGG   Planctopirus limnophila: Plim_2553
Entry
Plim_2553         CDS       T01225                                 
Name
(GenBank) recA protein
  KO
K03553  recombination protein RecA
Organism
plm  Planctopirus limnophila
Pathway
plm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:plm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Plim_2553
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plm03400]
    Plim_2553
DNA repair and recombination proteins [BR:plm03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Plim_2553
    RecFOR pathway proteins
     Plim_2553
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Plim_2553
SSDB
Motif
Pfam: RecA RecA_C ATPase Rad51 CobU ATPase_2 AAA_16 ABC_tran AAA_24 AAA_25 AAA AAA_14 AAA_22
Other DBs
NCBI-ProteinID: ADG68378
UniProt: D5SQ03
Position
complement(3318647..3319705)
AA seq 352 aa
MSPKAKPDKKSAAEVEREHVKLLDNTLGQIEKAFGRGSIMKLTDAGMDVDGIGSGALSLD
LALGGKGFPRGRIVEIFGPESSGKTTLALHCIANSQREGGIAAFIDAEHALDPAWAKKLG
VNLEELLVSQPSTGEEALQIAEMLIKSNAVDVVVIDSVAALVPKAELEGEIGDSHVGLQA
RMMSQAMRKLTGVISKAKTVVIFINQIREKIGVMFGSPETTPGGRALKFYCSVRADVRRL
ATLKEGDVTTGMRMKVKIVKNKVAPPFRVAEFDMLSSQGISFSGDLLDLGVAARLVERSG
SWFTYGEVKLGQGRDKARIYLEEHPELMAEIKAKVLELHAAGQHISTSSKGE
NT seq 1059 nt   +upstreamnt  +downstreamnt
atgtcgccgaaggccaagccagacaagaaatctgctgcagaagttgaacgcgagcatgtg
aagttgctcgataacacactggggcagatcgaaaaggcctttggtcgcggctcgatcatg
aagttgaccgatgccggcatggatgttgacgggattggttccggggcgttgtcgctggat
ttggcactgggtggtaaaggctttccacggggccggatcgttgagatcttcgggcccgaa
tcaagcggtaaaaccacgctggccctgcattgcattgcgaattcacagcgtgagggaggg
attgcggcctttatcgatgctgaacatgcactggatcctgcctgggcgaaaaagctggga
gtgaatctggaagagttactggtcagccagccttcgacgggagaagaagctctgcagatt
gccgagatgctgatcaaatcgaacgctgttgacgtcgtggtgattgactcggtcgcggcg
ctggttcctaaagcggaactggagggcgagattggcgattcgcatgtggggctgcaggcc
cgcatgatgagccaggccatgcgtaagctgaccggggtgatctccaaagctaaaaccgta
gtgatctttatcaatcagattcgtgagaagatcggcgtgatgttcggcagcccggaaaca
actcctggcgggcgggctctcaagttctattgctccgtccgggctgatgtccggaggctg
gcaactttgaaagagggggatgtcacgaccgggatgcgcatgaaggtcaagattgtcaaa
aacaaagtcgcacccccattccgtgtggctgagtttgacatgctgagttcacagggaatc
agcttttctggcgatcttcttgatctgggggtcgctgcgcggctcgttgagcgaagtggt
agctggtttacttatggcgaagtcaagctcggtcagggccgggataaagcccggatctat
ctggaagagcatccggagttgatggccgagatcaaggccaaggtgctggaactgcatgcc
gctggtcaacacatttccacctcttccaagggagagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (13)   
   Pfam (13)   
All databases (26)   

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