KEGG   Planococcus sp. PAMC 21323: Plano_1118
Entry
Plano_1118        CDS       T03510                                 
Name
(GenBank) formamidopyrimidine-DNA glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
pln  Planococcus sp. PAMC 21323
Pathway
pln03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pln00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    Plano_1118
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pln03400]
    Plano_1118
Enzymes [BR:pln01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     Plano_1118
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     Plano_1118
DNA repair and recombination proteins [BR:pln03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     Plano_1118
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS Zn-ribbon_8 zf-TFIIB
Other DBs
NCBI-ProteinID: AIY05083
UniProt: A0A0B4RA91
Position
1153032..1153901
AA seq 289 aa
MPELPEVEGVVRQIRPVSIGKKIEAVAVSDVIRLSKENGKEAIIKRLETDRFIENITGAQ
IVHVERRSKYIYFTLRKDNEFLLVNHLGMSGAWFYVDQLQSIPEDKFRRHVHIVLTLSDG
NLLAFSDIRRFGEMRVLQEEGDFPPLLLMAPEPFDDGALEHFLAMAESSKYNNKAIKEII
MDGQIISGCGNIYATEALFKMKIHPKRAASRISRKRKIELFKSIVAILLESIRAGGSTIS
DYRDINGESGNMQDRFGMYGKKQCTNCGTDTKTLKIGGRASVYCPTCQK
NT seq 870 nt   +upstreamnt  +downstreamnt
atgcctgaacttccagaagtcgaaggagttgttcggcaaatccgccctgtttcgattggt
aaaaaaattgaggctgtagcggtgtcggacgtcatccgcttatcgaaagaaaatggcaaa
gaagccattattaaacgattagaaactgatcgttttatcgaaaatataacaggtgcacaa
attgttcatgtagaacgtcgcagcaaatatatttattttacgttacgaaaagacaatgaa
tttttacttgtaaatcatttgggaatgtctggagcttggttctatgttgaccagctccag
tccattccggaggataaatttcgacgtcatgttcatattgtgttgactttaagtgatggc
aatttgttggcgttttcagacattcgtcgttttggtgaaatgcgggtattgcaagaagaa
ggagattttccaccgctactattaatggcgcctgaaccttttgatgatggcgcacttgag
cattttcttgcaatggcagaaagctcgaaatacaacaataaagcaattaaggaaatcatt
atggatgggcaaattatttctggctgcggcaatatatacgctacagaagcgctctttaaa
atgaaaattcatccgaaacgtgctgctagtcgcattagccggaagcggaaaatagaattg
ttcaaatcgattgttgctattttgctcgagagtattagagcgggtggcagtacaatttca
gattaccgcgatataaacggtgaatcaggcaacatgcaagaccgttttggaatgtatggc
aaaaaacaatgcacaaattgcggtacagatacaaagaccttaaaaattggcggtcgggct
tctgtttattgcccgacatgtcagaaatga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

Download RDF
DBGET integrated database retrieval system