KEGG   Pseudomonas lundensis: AA042_21255
Entry
AA042_21255       CDS       T05473                                 
Name
(GenBank) type VI secretion protein
  KO
K11900  type VI secretion system protein ImpC
Organism
plq  Pseudomonas lundensis
Pathway
plq02025  Biofilm formation - Pseudomonas aeruginosa
Brite
KEGG Orthology (KO) [BR:plq00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02025 Biofilm formation - Pseudomonas aeruginosa
    AA042_21255
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:plq02044]
    AA042_21255
Secretion system [BR:plq02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   AA042_21255
SSDB
Motif
Pfam: VipB VipB_2 PBC
Other DBs
NCBI-ProteinID: AOZ14887
Position
complement(4718981..4720456)
AA seq 491 aa
MSTHAAQQSSTENGEYSILDTIIAQTRLTPDDEAYDIAKRGVSAFIEELLKPQNNGEPVK
KAMVDRMIAQIDAKLSRQMDEILHHPDFQSLESSWRGLQLLVDRTDFRENIKIEILNVSK
EDLLDDFEDSPEVMQAGLYKHIYTAEYGQFGGQPVGAIIANYYLSPSSPDVKLMQYVSSV
ACMSHAPFIAAAGPKFFGLESFTGLPDLKDLKDHFEGPQFAKWQSFRQSEDSRYVGLTVP
RFLLRNPYDPEENPVKSFVYKETVANSHEHYLWGNTAYAFGTKLTDSFAKFRWCPNIIGP
QSGGAVEDLPLHHFESMGEIETKIPTEVLVSDRREYELAEEGFISLTMRKGSDNAAFFSA
SSVQKPKFFGISAEGKAAELNYKLGTQLPYMMIVNRLAHYLKVLQREQLGSWKERTDLEL
ELNKWIRQYVADQENPSAEVRGRRPLRAAQIIVSDVEGEPGWYRVSLNVRPHFKYMGADF
TLSLVGKLDKE
NT seq 1476 nt   +upstreamnt  +downstreamnt
atgagcacccatgcagcgcagcaaagcagtacggaaaacggcgaatacagcattctcgac
accatcatcgcgcagacgcgtctgacgccggacgatgaggcctatgacattgccaagcga
ggcgtgtcggcctttatcgaggagttgctcaagccgcagaacaatggcgagccggtcaag
aaggccatggttgaccgcatgatcgcgcagatcgatgccaagctcagccgccagatggac
gaaatcctgcaccaccctgatttccagtcgctggagtcgtcgtggcgtggcctgcaattg
ctggtcgatcgcacggacttccgtgaaaacatcaagatcgaaatcctcaatgtgtccaag
gaagacttgctggacgatttcgaggattcgccggaagtcatgcaggccggcctctataag
cacatctacaccgctgaatacggccagttcggtgggcagccggtgggcgcgatcatcgcc
aactattacctgtcgcccagctcgcccgacgtgaagctgatgcagtacgtgtccagtgtg
gcgtgcatgtcccatgcgccgttcattgcggcggccggtcccaaattctttggcctggaa
agcttcactggcttgccggacctcaaagacctgaaagatcactttgaaggcccgcagttc
gccaagtggcagagcttccgccaatcggaagactcgcgttacgtcggcctgacagtgccg
cgcttcttgctgcgcaacccgtatgacccggaagaaaacccggtcaagtcgttcgtctac
aaagaaaccgttgccaacagccacgagcactacctgtggggcaacacggcctacgccttc
ggcaccaaactgaccgacagcttcgccaaattccgctggtgtccgaacatcatcggcccg
caaagcggtggcgcagtcgaagacttgccgttgcaccatttcgaaagcatgggcgagatc
gagaccaagataccgaccgaagtgctggtgtccgaccgtcgtgagtacgaattggccgag
gaaggtttcatttccttgaccatgcgtaaaggcagcgacaacgcagccttcttctcggcc
agttcggtgcagaaacccaagttctttggcatcagtgccgaaggcaaagccgccgaactg
aactacaagctgggcacccagttgccgtacatgatgatcgtcaaccgtctggcccactac
ttgaaagtgctgcagcgcgaacaactcggatcgtggaaagagcgtaccgaccttgagctg
gaactgaacaagtggatccgccagtacgtggccgatcaggagaacccgagcgcggaagtc
cggggtcgtcgtccgctgcgtgcggcgcaaatcatcgtcagtgacgttgaaggggagccg
ggctggtaccgcgtcagcctcaatgtgcgcccgcacttcaagtacatgggcgctgatttc
acgttgtccctggtgggcaagctggacaaagagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (10)   

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