KEGG   Pelodictyon luteolum: Plut_1462
Entry
Plut_1462         CDS       T00291                                 
Name
(GenBank) Helicase RecD/TraA
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
plt  Pelodictyon luteolum
Pathway
plt03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:plt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Plut_1462
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plt03400]
    Plut_1462
Enzymes [BR:plt01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Plut_1462
DNA repair and recombination proteins [BR:plt03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Plut_1462
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_4 SH3_13 UvrD_C_2 Viral_helicase1 HHH_5 AAA_11 PIF1 AAA_22 nSTAND3 Helicase_RecD AAA_28 NTPase_1 AAA_16 Herpes_Helicase HHH_2 HHH RsgA_GTPase SLFN-g3_helicase DEAD UvrD-helicase UvrD_C T2SSE AAA_29 Rad17 AAA_18
Other DBs
NCBI-ProteinID: ABB24321
UniProt: Q3B2W0
Position
complement(1645129..1647348)
AA seq 739 aa
MNGKPEDGKPEDGKPEGVTATERLSGVVETVRFFNPESGFSVLRIANDEEDPLVTVVGCI
ASVSPGQHVEALGRWQDDRNWGRQFKAESLSVIAPESREGMERYLASGMLKGVGPHLASL
MMSAWGTDVFQIIETDPERLRDIPGIGPKKQALIVESWREHQAVREIMMFLQSHGVGTTR
ALKIYKVYGADSIGAINRDPYRLSRDIAGIGFRTADAIAQSIGIAADSPLRARAGMSWVL
QELSSKGHCRVPEPMLLDAARQLLQIPDSVLEEALQVECAAGRIVAVLEGEERYCYLEYL
WKAEQGVVEGIRRIAGGKLPWGRLDVERSVTEAEERSRLELSVSQREAVRLALSNKLLII
TGGPGVGKTTIIRTLLSIPEVFGLKVLLTAPTGRAAKRLSEATGREGRTIHRLLEFDPAT
FDFKRSAHNPLEADLVIVDEASMIDVVLMNRLLPAIPKNAALILAGDVDQLPPVGPGAVL
SDLISSGTVRVVRLTEIFRQAATSLIIQNAHRVNRGEGLLRHEGPGLGDFYFVESSSSDD
IRRKLVQIVAERIPERFGLDPLDDIQVLTPMNRGPLGAESLNVLLQERLNGGGGKRIERF
GVAYGRGDKVIQTVNNYEKEVFNGDIGIISAIDHEEGELQVLFDGREVRYQTGELDEMAP
AWAITIHKSQGSEYPAVVIPLSMLHYPMLERNLIYTALTRGRKLVMVIGEEKALRLAVGK
CSSKGRLTGLADALKGHVH
NT seq 2220 nt   +upstreamnt  +downstreamnt
atgaacggaaagcctgaagacggaaagcctgaagacggaaagcctgaaggcgtcacggca
acagagcggctcagcggagttgttgaaacggtccggttcttcaaccctgaatcaggcttc
tcggtgcttcgcatcgccaatgatgaagaggatccgttggtgaccgtggtcggctgcatt
gcgtccgtttctccgggccagcacgtcgaagcgctcggccggtggcaggacgacaggaac
tggggccggcagttcaaggccgaaagcctgtcggtgattgcccccgagagccgggagggg
atggagcgatatcttgcttccggcatgcttaaaggggtggggccccacctggcctccctc
atgatgagcgcctggggaacggatgtattccagataatcgaaaccgatccggaacggctt
cgcgacattccgggtatcgggccgaaaaaacaggcactcatcgtggagtcgtggcgcgag
catcaggcggtgcgtgagatcatgatgtttctccagtcgcacggcgttggtacgacgagg
gcgttgaaaatctataaggtctacggcgctgactccattggcgccatcaaccgtgatccc
taccggctcagccgagatattgcgggcatcgggttcaggacggccgatgccattgcccaa
agcatcggtattgcagcggattcaccgctgcgcgcacgggccgggatgagctgggtgctg
caggaactttcttccaagggtcactgcagggttcccgaaccgatgcttctcgatgctgcg
cgtcagctgctgcagatacccgacagcgtccttgaggaggctctccaggttgaatgtgcc
gcggggcgcattgtagccgtcctggagggagaggagcggtactgttatctggagtacctc
tggaaggcagagcagggcgtggtcgagggcatccggcggattgccggagggaagcttccc
tggggcaggctggacgtagaacgttcggtcactgaggctgaagagcgttcacgcctggaa
ctctctgtgtcgcagcgggaagccgtgcggctggcgctttccaacaagctgctcatcatt
accggcggccccggtgtcggcaagaccaccatcatccgtaccctgctttccattccggag
gtgttcggcctcaaggtgctgcttaccgcaccaaccggcagggcggccaagcgcctttcc
gaggcgaccggccgggagggtcgaactatccaccgccttctggaattcgacccggcaacg
ttcgatttcaagcgctctgcacacaatccgctcgaggcggatctggtgattgtcgatgaa
gcctccatgatcgacgtggtattgatgaaccggctgcttccggccataccgaagaacgcc
gccctcatccttgccggcgacgtggaccagcttccgcctgtcggcccgggtgccgtgctc
agtgacctcatcagttccggaacggtacgggtggtgcgccttacagagattttccgccag
gcggcaacttcgctcatcatccagaacgctcaccgtgtcaaccggggggaggggctcctt
cgtcatgagggcccggggctcggtgacttttatttcgtggagtcctcgagttccgacgac
atccggagaaaactggtgcagattgtcgcggaacggatccctgagcgcttcgggctcgac
ccgctggatgacattcaggtactgacccccatgaaccggggacctctcggtgcagagtcg
ctgaatgtcctccttcaggagcggctgaacggcggaggcgggaagcggatcgagcggttc
ggggtcgcctacggcaggggggacaaggtgatccagaccgtgaacaattacgaaaaagag
gtcttcaacggcgatatcggaatcatttcggccatcgaccacgaagagggagagcttcag
gtgctttttgacggccgcgaagtgcgctaccagacgggtgaacttgatgaaatggctcct
gcgtgggccatcaccatccataaaagccagggatcggaatacccagcggtggtcatcccg
ctctcgatgctgcactacccgatgctggagcgcaacctcatctacacggcgctcaccaga
gggcggaagctggtcatggtcattggggaggaaaaggccctccgccttgcggtggggaag
tgcagttcgaaaggtcgcctcaccggcctcgccgatgccctcaaggggcatgtgcactga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (27)   
   Pfam (27)   
All databases (49)   

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