KEGG   Photorhabdus laumondii subsp. laumondii DSPV002N: A4R40_21525
Entry
A4R40_21525       CDS       T05478                                 
Name
(GenBank) hypothetical protein
  KO
K03546  DNA repair protein SbcC/Rad50
Organism
plum  Photorhabdus laumondii subsp. laumondii DSPV002N
Brite
KEGG Orthology (KO) [BR:plum00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plum03400]
    A4R40_21525
DNA repair and recombination proteins [BR:plum03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     A4R40_21525
    Archaeal homologous recombinant proteins
     A4R40_21525
SSDB
Motif
Pfam: AAA_23 SMC_N SDA1_C
Other DBs
NCBI-ProteinID: AWK43897
Position
complement(5073284..5076442)
AA seq 1052 aa
MKIKKVEIQAFKSYLEKKDGTFDFIHSTSGEPANFVSLFSPNGFGKTSFFDAIDFAITKK
ISRYVRNERLEKINLEESNQYNIKGESQLIIRNKNAPKNIETRVEVITSKSEKPFISSYK
KGRKGSSDWRIQSKSITNKYFESSMLYQESIDSFLRETDSETRFKKFSEVDDELVNINSA
RSTLLSLKSDVSKKKQELVDTKNKLSSEINRQKDNKDYVHSINIIIKDVNEYLDEIKIDE
VIAPFTKNEHFHLSARLKEAENIIKNRVKENDEKLSKIEVNLSQLKLGASIYYKYKECIN
ERSLILDKIKFYDEVGALKESFNTLEKELLLNQDVILSLRELNKNAHEYFTYKLKLDSTL
KEIEELKLKLKMNDALIKSLNDSLNEKIIFHQKVCENIDQLGKEQANLYFVFNTIKDKST
SLDGVEKELANMEIEIKKNKGQKDVADICLSSLEKLTLFDFKWLPEFFIIHEDNKNELSD
IYAKYCYVYKSKVEIDGKIKSINKELESINQQQTDISFLIDKASSIVISTKQSHCPLCER
DNETYDELISRINNNSMLSDIEKKKNASKSSLMEELEQLSMKLDRFNVEFIEKKKSISNG
LKDEISSLENLINESSQKKSTLVESKNIFISEINKFNSSVMFMSKYDYSKHLISKVQCER
DREHSISKEIEDIKESIKSRVNQIELNKKIIDLENERFKLVVHLSKYSDFIKSNQLSEGV
NKDDFISFVMLKTDKLNDSQKGLKDRIGKIVIKINKLESENKDSQFKGVSKEKMNALLVD
LEDKMSLLSKENQWFISVADSFDNEDNSVVYTKVKDSLELQVTGINVKNRTLSDCLAKFS
SIESISSKIVDYSDTSLLEKELYSISSKVSKLSEVIVELDSDIRKLGNEIKLRVDSFFNT
ELINKIYSSIDPHPEYKKIVFTCTSDDNPRLLISAQSEKNDKLMSPTLSFSSAQINVLAL
SIFLARALSSKDDEGNPVDCILIDDPVQSIDAINTLGLIDTLRMLSIMFNKQIIVTTHDE
NFHELLKKKMPSDLFSSKFLRLSSFGKVSSDA
NT seq 3159 nt   +upstreamnt  +downstreamnt
atgaaaataaaaaaagttgaaatacaagcatttaaatcatatttagagaagaaggatggt
acttttgactttattcatagtacatcgggagagcctgcgaactttgtatcactattctca
ccaaacggattcggtaaaacatcgttctttgatgcaattgactttgctatcacaaaaaaa
ataagccgatatgtgagaaatgaaaggttagagaaaattaatttagaagaaagtaatcaa
tataacattaaaggtgaatctcaactgataataagaaataaaaatgctcctaaaaatatt
gagacgcgagtggaggttattactagtaaatctgaaaagccatttatttcatcatataag
aaaggaagaaagggaagttcagactggagaattcaatcaaagagtataacaaataaatat
tttgaatcctctatgttgtatcaagaatctattgattcttttttaagagaaaccgactct
gaaacaagatttaaaaaattctccgaggtagatgatgaattagtaaacattaatagtgca
cgttctacgctcttatcattgaaatcagacgtgtctaagaaaaaacaagaactagttgac
accaaaaataaactatcaagtgaaataaataggcaaaaagataacaaggattacgttcat
agcattaatataataattaaagatgtaaatgagtacttagatgaaataaaaattgatgag
gtaatagcaccatttactaaaaatgaacattttcacctttcagctcgtttaaaagaagct
gaaaatataattaaaaatagagttaaagaaaatgatgaaaagctttctaaaatagaggtt
aatttatctcaattaaaacttggtgcatcgatctattataaatacaaagagtgtattaat
gaaaggtcattaattttagacaaaattaagttttatgatgaagttggtgccctcaaagaa
agttttaatacgttagagaaagagttattattaaatcaggatgttattttaagcctcaga
gaattaaacaaaaatgcccatgaatattttacctataagttaaagttagatagtactctc
aaagagattgaagaattaaagctgaagttaaaaatgaatgatgctttaatcaaaagttta
aatgattcactcaatgaaaaaatcatttttcaccaaaaggtttgtgagaatattgaccaa
ttaggtaaagagcaagccaacttatattttgtgtttaatactataaaagataaatcaaca
agtttagatggtgttgaaaaagaactagctaatatggaaatagagattaaaaaaaataaa
ggccagaaggatgtggcagacatatgtttatcatcattagagaagttgaccctttttgat
tttaaatggctgcctgaattttttattatccatgaagataataaaaatgagttatctgat
atttatgctaagtattgttacgtttacaaaagtaaggttgagattgatggtaaaataaaa
tcaataaataaagagttagaaagtataaatcaacaacaaactgacatatcttttttaata
gataaagcaagtagtattgtcataagtacaaaacaatctcactgtcctttatgtgagcga
gataacgaaacctatgatgagcttatttctagaattaataacaattctatgctatcagat
atagaaaagaaaaaaaatgcctcgaaaagttcattgatggaagaactagaacaattatct
atgaagttggatagatttaatgttgaatttattgaaaagaaaaaatcaatatcaaatggt
ttaaaagatgaaatttcttccttggagaatttaataaatgaatcttctcagaaaaaatct
actcttgtagaaagtaaaaatatctttatatctgaaataaataaatttaactcatctgta
atgtttatgtcaaagtatgactattcaaaacatttgatttcaaaagtgcaatgtgaaaga
gatagagagcattctatatctaaagagattgaggacataaaagagtcgataaagtcaaga
gttaatcaaatagagcttaataagaaaataattgacctagaaaatgaacgttttaaattg
gtggtacatttatctaagtattctgattttattaaatctaatcaattaagtgaaggcgta
aataaggatgactttatttcttttgttatgcttaaaactgacaaattaaatgatagtcaa
aaggggctaaaggatagaatcggaaaaattgtcattaaaattaacaagcttgaaagtgag
aataaagattcacaatttaaaggtgttagtaaggaaaagatgaacgccttattggttgat
ttggaagataagatgtctttattatctaaggaaaaccaatggtttattagtgtggcagac
tcatttgataatgaggataactctgtggtttacacaaaagtgaaagattctctagagtta
caagtcactggtatcaatgttaaaaacagaacgttatctgattgcttggccaaattttca
tctattgagagcatttcatcaaagatcgttgattactctgataccagcttactagagaaa
gaactttatagtatatcctctaaagtttctaaattgagtgaagtaattgttgaacttgac
agtgatataagaaaactcgggaatgaaataaaattaagagttgattctttcttcaataca
gaattgataaataagatatatagcagcattgatccacatcctgagtataaaaaaattgtt
tttacttgtacgtctgatgataatccaaggttattaatatctgcacaaagtgaaaaaaat
gacaaactaatgtctccaactttgagttttagttctgctcaaattaatgtcttagctttg
agtatttttcttgcgagagccttgtcttcaaaggacgatgaaggcaatcctgttgattgc
atactgatagatgatcctgttcagtcaattgatgcaatcaatactttaggtttgatcgat
actcttcgaatgctttctattatgttcaataagcaaattatagtgacaactcatgatgag
aattttcatgagttgctcaagaaaaagatgccaagcgatctattttcttctaaatttttg
agattaagctcttttggaaaagtaagttccgatgcatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (9)   

Download RDF
DBGET integrated database retrieval system