KEGG   Paenibacillus lautus: D5F53_02315
Entry
D5F53_02315       CDS       T05701                                 
Symbol
sigY
Name
(GenBank) RNA polymerase sigma factor SigY
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
plw  Paenibacillus lautus
Brite
KEGG Orthology (KO) [BR:plw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:plw03021]
    D5F53_02315 (sigY)
Transcription machinery [BR:plw03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     D5F53_02315 (sigY)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r4_2 Sigma70_ECF HTH_23 HTH_16
Other DBs
NCBI-ProteinID: AYB42195
UniProt: A0A385TM16
Position
493482..494039
AA seq 185 aa
MISIMIPGEEDLIRQAQLGDAAAMALLFKQHYSFLYKYLLKVTMDPMLAEDTAQDTIVRC
MENMNRYNGTSSFSSWMITIATRLFIDNTRRKKREKKWLEQEAVQSARRMRWQMERRGEE
WTDMLDGLTRLSEDHRIAILLKHYYGYSYEEIGTMLDIPAGTVKSRTAYGIKQLRKEMGD
DGQRT
NT seq 558 nt   +upstreamnt  +downstreamnt
atgatttcaatcatgatccctggcgaagaggatttgatacgacaagcgcagttaggagat
gctgctgccatggcgctgctgttcaagcagcattattccttcctttataaatatttgctg
aaagtgacgatggacccgatgcttgccgaagataccgcgcaggataccatcgttcgatgc
atggagaatatgaaccgctacaacgggacttcgtccttctcctcttggatgattaccatt
gctacccgtttgttcatcgataatacccggcgaaagaaacgggagaagaaatggctggag
caggaggcggttcagtcggcaaggcggatgcgctggcaaatggagcggcggggagaagag
tggacggatatgctggatggattgacccgcttatccgaggatcatcggattgccatcctg
ctgaagcactattacggctacagctacgaggaaatcggaacgatgctcgacattcccgca
ggaacggtgaaatcgcggaccgcctacggcattaaacagctgcgaaaggagatgggtgac
gatggtcaaaggacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (12)   

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