KEGG T05387: CW734

Planococcus sp. MB-3u-03: CW734_11165

Entry

CW734_11165       CDS       T05387

Name

(GenBank) tRNA pseudouridine(55) synthase TruB

K03177

tRNA pseudouridine55 synthase [EC:5.4.99.25]

Organism

plx Planococcus sp. MB-3u-03

Brite

KEGG Orthology (KO) [BR:plx00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:plx03016]
    CW734_11165
Enzymes [BR:plx01000]
5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     CW734_11165
Transfer RNA biogenesis [BR:plx03016]
Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    CW734_11165
Prokaryotic type
    CW734_11165

SSDB

Motif

Pfam:

TruB_N TruB_C_2

Other DBs

NCBI-ProteinID:

AUD14084

Position

complement(1964886..1965815)

AA seq 309 aa
MEPNGILPLWKEPGMTSHDCVFRLRKILKTKKVGHTGTLDPQVDGVLPICLGRSTKVAEY
ITDQGKTYEAEVLIGFSTETEDAEGAVVEQDTGDKTITRKQLEGVLQSLTGDIEQIPPMY
SAVKVNGRKLYEYARKGEAVERPVRIVHIDSIELLDDADIWQGQNIRFRIRIRCGKGTYI
RTLAVQIGEALGYPAHMSQLTRTQSGSFTKQQCVTLAEVEEIAQNGDIGSILQPLAYGLS
AFPFEEITPDLLFGIKNGQVLEAHPVLKAEPFVVFTYQGVPAALYKRHPDKPGKMKPEKM
FGFPPTDEV

NT seq 930 nt +upstreamnt +downstreamnt
atggaaccgaatgggattcttccattatggaaagaaccgggcatgacgtcccacgattgc
gtttttcgcttgcggaaaatcctgaaaacgaaaaaagtcgggcataccgggacgctcgat
ccccaagtggacggcgtattgcccatttgcctcgggcgatcgaccaaagtggcagagtat
atcactgatcaaggaaaaacgtacgaagcggaagtattgatcgggttttcaacggaaaca
gaagatgcagaaggcgcagtagtggagcaagacacgggggacaagacgattacccgaaag
cagctagaaggcgtattgcaaagcctgaccggcgacattgaacaaatcccgccgatgtat
tccgccgtcaaagtgaacggcagaaagctttacgaatacgcgcgcaaaggcgaagcggtg
gaacgcccggtgcggatcgtgcatattgactcgattgaacttttggatgacgcggacatt
tggcaagggcagaatatccgtttccgcatccgcatccgctgtggcaaaggaacctatatc
cggacgcttgctgtccagatcggtgaagcgcttggctatccggctcatatgtcacagctg
acacgcacgcaatccggcagttttacgaaacaacaatgtgtgacgcttgccgaagtggag
gaaattgcgcaaaatggggatatcggttctattttgcagcctcttgcctatggcttaagt
gcatttccttttgaagaaatcacgccggatttattgttcggcatcaagaatggccaagta
cttgaggcgcatccggtcttgaaggcggaaccgtttgtcgttttcacgtatcaaggcgta
ccggcagcgttgtataaacggcatccggataagccgggcaaaatgaaacccgaaaaaatg
tttggatttcctccaacggacgaggtgtag

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (10)   

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