KEGG   Planococcus sp. MB-3u-03: CW734_11475
Entry
CW734_11475       CDS       T05387                                 
Name
(GenBank) DNA-directed RNA polymerase subunit omega
  KO
K03060  DNA-directed RNA polymerase subunit omega [EC:2.7.7.6]
Organism
plx  Planococcus sp. MB-3u-03
Pathway
plx03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:plx00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    CW734_11475
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:plx03021]
    CW734_11475
   03400 DNA repair and recombination proteins [BR:plx03400]
    CW734_11475
Enzymes [BR:plx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     CW734_11475
Transcription machinery [BR:plx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     CW734_11475
DNA repair and recombination proteins [BR:plx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      CW734_11475
SSDB
Motif
Pfam: RNA_pol_Rpb6 STIV_B116-like
Other DBs
NCBI-ProteinID: AUD14134
Position
complement(2029768..2029992)
AA seq 74 aa
MLYPSVDKLKSRIDSKYSLVALASKRARQLHEHGDEKLDSYVSHKAVGKALEEIAAGALT
PVQQDASAIYEDEI
NT seq 225 nt   +upstreamnt  +downstreamnt
atgttatacccatccgttgataaactaaaaagccgcatcgattcgaaatactcactggtc
gctttggcgtccaagagagcccgccaattgcacgaacatggcgatgagaaactggattcc
tacgtatcccataaagcggttggaaaagcgcttgaagagattgcagctggcgcattgacg
ccggttcagcaagatgcatccgcgatttacgaagacgaaatttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system