KEGG   Pseudoalteromonas luteoviolacea: S4054249_14900
Entry
S4054249_14900    CDS       T04577                                 
Name
(GenBank) AAA family ATPase
  KO
K02343  DNA polymerase III subunit gamma/tau [EC:2.7.7.7]
Organism
plz  Pseudoalteromonas luteoviolacea
Pathway
plz03030  DNA replication
plz03430  Mismatch repair
plz03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:plz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    S4054249_14900
   03430 Mismatch repair
    S4054249_14900
   03440 Homologous recombination
    S4054249_14900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:plz03032]
    S4054249_14900
   03400 DNA repair and recombination proteins [BR:plz03400]
    S4054249_14900
Enzymes [BR:plz01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     S4054249_14900
DNA replication proteins [BR:plz03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     S4054249_14900
DNA repair and recombination proteins [BR:plz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     S4054249_14900
SSDB
Motif
Pfam: DNA_pol3_delta2 DNA_pol3_gamma3 DNA_pol3_tau_5 AAA RuvB_N AAA_22 AAA_5 AAA_14 AAA_assoc_2 AAA_18 AAA_30 AAA_16 DNA_pol3_delta AAA_7 TsaE AAA_19 AAA_2 PIF1 AAA_24 nSTAND3 Rad17 TniB SKI Mg_chelatase
Other DBs
NCBI-ProteinID: AOT09063
Position
1:complement(3532885..3535413)
AA seq 842 aa
MSYQVLARKWRPQSFHEMMGQEHVKQALINALNEQRLHHAYLFTGTRGVGKTTIARIFAK
SLNCEQGISSTPCGQCSTCEEIEAGKFIDLIEIDAASRTKVEDTREILDNVQYAPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPEHVKFLLATTDPQKLPITILSRCLQFNLNAMAK
GQIVEQLAKILPKENFQFEDDALSVLAKAADGSMRDALSLTDQAIAQTNGHLTVAAVQQM
LGLMDSAHAMLLMSAVLCQDGNALMAEVENIALKNGNFVSVIDDLIALLHIIQLTQLVPQ
AAHVGQFDQQQVKALAEEISPQTAQMLYQLLLSGKKDLSWAPDAKLGFEMVMLRLLAFEG
TDFSQTGVLPAATKVHQAQEKKSKAGALRDILNNNQKKTLNSEPEAHLAQPQARPANTAQ
QSALAQPMQAEPVQHAPHSTTTHVAQAETVHHAPSSTTTHVAQTEPEHHAPHSAPTHATQ
AEPIHNALHHASEHAESHSEAGRPTTPIAPHRAPLGGGSTPPEYEQQYNDIMAQAAAQGF
NEPTPESNGLPENTAQVSANADTSPGQLYAQKQGQAQSAIAKILQNRQISGAGKLLGGKE
TPKKPSSDNHIPKNNPTPSYEQRVEQPAPNNLPVEGEGTRIPDQAPVATKPHTPIPTRTK
TKKPEISERFKKDESKLAPELLEQLSPTPAKVDEQEHVIEMPVPENFTSPISSLKFAYEK
DDWANLIEKMALSGRVRQFALHAMYEKKGNLCVLKAEQNQQHLDSPMLRDKLQQSFTLAL
SEPVELQMEFVEQVQSTPFLIQQDIDQQRYLEAVDAVNSDPIIQTMVAEFDAVVNEKSVK
AL
NT seq 2529 nt   +upstreamnt  +downstreamnt
atgagctatcaggtcttagcaagaaagtggcggcctcaatcattccatgaaatgatgggt
caggaacatgtaaagcaggcattgattaatgccttaaatgagcaaaggttacatcatgct
tatttgtttacaggtacccgaggtgtgggcaaaacgactattgctaggatctttgctaaa
agcttgaattgtgagcaaggtatatcttctaccccgtgtgggcagtgcagtacttgtgaa
gagatcgaggcaggtaaattcatcgatctgattgagattgatgcggcatcaagaaccaaa
gtagaagatacgagggaaatattagataacgtccaatatgcaccaacgcgaggccgttac
aaagtctatttaattgacgaagtacacatgctgtcgaagcacagtttcaacgcattactc
aagacgttagaagagccgccagagcatgtgaagtttttactggccacgacggatccacaa
aagttaccaattacgattttatctcgctgtttacagtttaatttgaatgcgatggcgaaa
ggtcaaattgttgaacaactggcgaaaatattaccaaaagaaaacttccaatttgaagat
gatgcgttaagtgttttggctaaggctgccgatggtagtatgcgtgatgcactaagcctt
accgatcaagcaattgcacaaaccaatgggcatttgactgtagcagcagtacagcagatg
ctaggcctgatggatagtgcacatgcgatgttactcatgagtgctgtattgtgccaagac
ggtaatgctttgatggcagaagttgaaaacattgctttgaaaaatggtaactttgttagt
gtcattgatgacttaatagcgctattacacatcatccaattgacacaacttgtgccacag
gctgcacatgttggtcaatttgatcaacaacaagtgaaggctctggcagaagaaatttca
ccacaaacagcccagatgttataccagttgctattgagcggcaaaaaagatttaagctgg
gcgcctgatgctaagttaggctttgaaatggtaatgcttaggttgcttgcttttgaaggc
actgacttctcacaaaccggagttctccctgctgctactaaagtacatcaagcacaagaa
aaaaagtccaaagcaggtgcgttgcgcgacatattaaacaataaccaaaaaaaaacgtta
aatagcgaacccgaagcgcacttggctcaacctcaagctaggccagctaatactgcgcag
caaagtgcattggcgcaacccatgcaggcagaacctgttcagcatgcaccgcatagcaca
acgacgcacgtagcgcaggcagaaactgtacatcatgcaccgtctagtacaacgacgcac
gtggcgcagacagaaccagaacatcatgcaccgcatagtgcgcctacgcatgctacgcag
gcagaaccaatacataacgcattgcatcatgcatcagagcacgctgaatctcacagtgaa
gcaggtcggccaactacaccaatagctcctcatagagcccctttaggcggggggtctaca
ccgcctgaatatgaacaacaatataacgatatcatggcgcaagctgcggcacagggcttt
aacgagcctacgccagagagtaatggcttacctgaaaacactgctcaagtatctgcgaac
gctgatacatcaccaggccaactttatgcgcaaaagcaagggcaagcgcaatcagccatc
gccaaaattttgcaaaatagacagatttctggtgcaggaaagttattagggggcaaagaa
acgccaaaaaagcccagtagtgataatcacattcctaaaaacaatccaactccttcctac
gagcaacgggtagagcaaccggcaccaaacaacttgccagttgagggagagggaaccaga
atacctgatcaagccccagtcgctacaaagcctcacactccgattccaacgcgcactaaa
actaaaaagcctgaaatatcagagcgatttaagaaagatgagagtaagttagcgccagag
ttactggagcaactatcaccgactcccgcaaaagttgatgagcaagagcatgtaattgaa
atgcctgtgcctgaaaactttactagcccaattagcagcttgaagttcgcatatgaaaaa
gatgattgggcaaacttaatcgagaaaatggcgctcagtggtcgcgttaggcagttcgct
ttgcatgcgatgtacgagaaaaagggcaatctgtgtgtattaaaggctgagcaaaatcag
cagcatttagactcgcctatgcttagagataaattacagcagtcatttacgttggcctta
agcgagccggtagagctgcaaatggagtttgttgagcaggtgcaatctactccgttttta
atacaacaagatattgatcaacagcgatatttagaagctgtagatgccgtcaattcagac
cctattatccagacgatggtggctgaatttgatgcggtggtaaacgaaaaatcggtaaag
gcattgtaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (24)   
   Pfam (24)   
All databases (36)   

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