KEGG   Pseudoalteromonas luteoviolacea: S4054249_19270
Entry
S4054249_19270    CDS       T04577                                 
Name
(GenBank) DNA-formamidopyrimidine glycosylase
  KO
K10563  formamidopyrimidine-DNA glycosylase [EC:3.2.2.23 4.2.99.18]
Organism
plz  Pseudoalteromonas luteoviolacea
Pathway
plz03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:plz00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    S4054249_19270
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:plz03400]
    S4054249_19270
Enzymes [BR:plz01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.23  DNA-formamidopyrimidine glycosylase
     S4054249_19270
 4. Lyases
  4.2  Carbon-oxygen lyases
   4.2.99  Other carbon-oxygen lyases
    4.2.99.18  DNA-(apurinic or apyrimidinic site) lyase
     S4054249_19270
DNA repair and recombination proteins [BR:plz03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA glycosylases
     S4054249_19270
SSDB
Motif
Pfam: Fapy_DNA_glyco H2TH zf-FPG_IleRS
Other DBs
NCBI-ProteinID: AOT09834
Position
1:complement(4475937..4476746)
AA seq 269 aa
MPELPEVEVSRLGIEPHIKGHIVNEVRIHNGSLRWPVPEDVALLAGSAILAVRRRAKYLL
LDSEVGTGILHLGMSGNLRVVEQNEPLKKHDHVELLFDNGLALRLNDPRRFGAFLWQEPE
QQHSVFAKLGPEPLTEAFDAEHLYQASRGKKVAVKQFIMDNHVVVGVGNIYANESLFKAG
IHPKREAGKISLARYQKLTPIIKETLAAAIEQGGTTLKDFAQSDGKPGYFAQELLVYGRK
GEPCVQCDTTLQEIRLGQRSTVYCTKCQR
NT seq 810 nt   +upstreamnt  +downstreamnt
atgccagaattaccagaagttgaagtcagtcgtttaggtattgagcctcacatcaaaggg
cacattgtcaatgaagttcgtatccataacggtagtttacgttggcctgtccctgaagat
gttgcgcttttagctggaagcgctattttagccgtgaggcgcagagctaaatatttacta
ctggacagtgaggtcggcactgggatccttcacttggggatgtctggcaatttacgggtc
gtcgagcaaaatgagcctttgaaaaagcatgatcatgttgaactgttgtttgataatggt
ctggctttgcggctcaatgatccacgccgttttggcgcgtttttatggcaagaacctgaa
cagcagcacagtgtttttgctaagttgggcccagaacctttgacagaagcttttgacgcc
gagcatttatatcaagccagccgtggcaaaaaagtcgcggtgaagcaatttattatggac
aaccatgtggtcgttggagtgggtaacatttatgccaacgagtccctgttcaaggcgggg
atccacccaaagcgtgaagccggtaaaatttccttagcacgttatcaaaagctgacaccg
atcattaaagaaacgctcgcagcagccattgaacaaggtggcacgaccctcaaggatttt
gcccaaagtgatggtaaaccgggttattttgctcaagagctactcgtatatggccgtaaa
ggcgagccctgcgtgcaatgcgataccactttacaagagatccgattagggcagcgcagc
actgtatattgtactaagtgccaacgctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (13)   

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