KEGG   Prochlorococcus marinus subsp. marinus CCMP1375: Pro_0001
Entry
Pro_0001          CDS       T00137                                 
Symbol
dnaN
Name
(RefSeq) DNA polymerase III beta subunit
  KO
K02338  DNA polymerase III subunit beta [EC:2.7.7.7]
Organism
pma  Prochlorococcus marinus subsp. marinus CCMP1375
Pathway
pma03030  DNA replication
pma03430  Mismatch repair
pma03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Pro_0001 (dnaN)
   03430 Mismatch repair
    Pro_0001 (dnaN)
   03440 Homologous recombination
    Pro_0001 (dnaN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pma03032]
    Pro_0001 (dnaN)
   03400 DNA repair and recombination proteins [BR:pma03400]
    Pro_0001 (dnaN)
Enzymes [BR:pma01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Pro_0001 (dnaN)
DNA replication proteins [BR:pma03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Pro_0001 (dnaN)
DNA repair and recombination proteins [BR:pma03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Pro_0001 (dnaN)
SSDB
Motif
Pfam: DNA_pol3_beta DNA_pol3_beta_3 DNA_pol3_beta_2 DUF4097
Other DBs
NCBI-GeneID: 1461379
NCBI-ProteinID: NP_874395
UniProt: Q7VEL1
Position
174..1331
AA seq 385 aa
MKLVCSQIELNTALQLVSRAVATRPSHPVLANVLLTADAGTGKLSLTGFDLNLGIQTSLS
ASIESSGAITVPSKLFGEIISKLSSESSITLSTDDSSEQVNLKSKSGNYQVRAMSADDFP
DLPMVENGAFLKVNANSFAVSLKSTLFASSTDEAKQILTGVNLCFEGNSLKSAATDGHRL
AVLDLQNVIASETNPEINNLSEKLEVTLPSRSLRELERFLSGCKSDSEISCFYDQGQFVF
ISSGQIITTRTLDGNYPNYNQLIPDQFSNQLVLDKKYFIAALERIAVLAEQHNNVVKIST
NKELQILNISADAQDLGSGSESIPIKYDSEDIQIAFNSRYLLEGLKIIETNTILLKFNAP
TTPAIFTPNDETNFVYLVMPVQIRS
NT seq 1158 nt   +upstreamnt  +downstreamnt
atgaaacttgtttgttctcaaattgagctcaatacagctcttcaactagttagtagagct
gtagccactaggccttcgcatccagtattggcaaatgtattgcttactgctgatgcggga
actggaaaactaagcttaactggatttgatcttaatttaggaattcaaacatcgcttagt
gcttctatcgaaagtagtggagcaattacagttccctcaaaacttttcggagaaataata
tcaaaattatctagtgaatcttctataactttatcaacagatgattctagtgaacaagtt
aatttaaagagtaaaagtggaaattatcaggtaagagctatgagtgctgatgattttcct
gatttgcctatggtagaaaatggagcttttttaaaggttaatgctaattcttttgctgtt
tcattaaaatctactttatttgctagtagtacagatgaggcgaaacagattttaacaggt
gttaatttatgttttgaaggtaattccttaaagtcagctgctacagatggtcatagatta
gctgttttagatcttcagaatgtaatagcttctgaaactaatcctgaaattaataattta
tctgaaaaattagaagtaactctaccatctagatcattaagagagttagaacgttttcta
tctggatgcaaatcggattctgaaataagttgtttttatgatcaaggtcaatttgttttt
atttcttctgggcaaattataacgacaagaacactagatggtaattaccctaattataat
caattaattcctgatcaatttagtaatcaattagttttagataaaaaatattttatagca
gctttagagcgtattgctgttttggcagagcaacataacaatgtggttaaaatttcaact
aataaggaattacaaattttgaatatctctgctgatgcgcaagatcttggtagtggttcg
gaatctatacctataaaatatgattctgaagatattcaaattgcttttaattcaagatat
ttattagaaggtttaaaaattatagaaacaaatacgattttattaaagtttaacgctcct
acaactccagcaatatttacacctaatgatgaaactaattttgtatatttagttatgcct
gtacagattcgttcttaa

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (757)   
   KEGG ORTHOLOGY (1)   
   RefGene (753)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (771)   

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