KEGG   Prochlorococcus marinus subsp. marinus CCMP1375: Pro_0151
Entry
Pro_0151          CDS       T00137                                 
Symbol
holB
Name
(RefSeq) ATPase involved in DNA replication
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
pma  Prochlorococcus marinus subsp. marinus CCMP1375
Pathway
pma03030  DNA replication
pma03430  Mismatch repair
pma03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pma00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Pro_0151 (holB)
   03430 Mismatch repair
    Pro_0151 (holB)
   03440 Homologous recombination
    Pro_0151 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pma03032]
    Pro_0151 (holB)
   03400 DNA repair and recombination proteins [BR:pma03400]
    Pro_0151 (holB)
Enzymes [BR:pma01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Pro_0151 (holB)
DNA replication proteins [BR:pma03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Pro_0151 (holB)
DNA repair and recombination proteins [BR:pma03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Pro_0151 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2
Other DBs
NCBI-GeneID: 1461530
NCBI-ProteinID: NP_874545
UniProt: Q7VE62
Position
complement(151418..152368)
AA seq 316 aa
MKDLKELFKEFKYQKLAIELLSSSLEQGRVAPTYLFKGPKGVLQKEIAFRFLEGIADQSI
NSKNIRNRLISGNHPDLYLIEPTYLMQGNLIKQSDAKNESFKNHIEPQIRVEQIKDLKVF
LNKKPVESTLSMALLEDVDTLNESASNALLKTIEEPTSSVLILISSRPERLLDTIKSRCQ
IIPFKPFENDLLNEILIKTNIKKTLTNMHKELFYLSNGSPYLLKQNLEIIDAIPESIWFK
VERLPIKALDALLLAKEITEKLTAEQQIWLINWMQQYYWIKKTNSIIIKRLEQLKLHLKS
YVNQKIAWEIALIDLI
NT seq 951 nt   +upstreamnt  +downstreamnt
atgaaagatcttaaagagctttttaaagagtttaaatatcaaaagttagcaatagaatta
ctatcgtcttcgcttgaacaaggtcgcgttgctccaacatatctttttaaagggcctaaa
ggagtattgcaaaaagaaattgcatttcgatttttagaaggaatcgctgatcaatctata
aacagcaaaaatatacgtaatcgtttaatttcaggcaatcatcctgacctttatttaatt
gagccaacatacttaatgcaagggaatttaataaagcaatcagatgcaaaaaatgaaagt
tttaaaaatcatatagagcctcaaattagagtagagcaaataaaggatttaaaggtattt
ttaaataagaagccagtcgaatcaacattaagtatggctttattagaggatgtagataca
ttaaacgaatcagcatcaaatgcacttctgaaaacaatagaagagccaacaagtagtgtc
ttaatattaatttcatctaggccagaaagactattagatacaattaagtctagatgtcaa
atcatcccatttaagccatttgagaatgatcttcttaatgaaatacttatcaagactaat
ataaaaaaaacattgaccaatatgcacaaagaactgttttatttatcaaatggctctcct
tacttattaaaacaaaatttagagattattgatgcgataccagaaagcatatggtttaaa
gttgaaaggcttccgatcaaggcattggatgctttattattagcaaaagaaattacagaa
aaactaactgctgagcaacaaatctggctcataaattggatgcaacaatattattggatt
aaaaaaactaactcaataataataaaaaggctagaacagcttaagcttcatttaaaaagt
tatgtcaatcaaaaaatcgcctgggaaattgcattgatagatctaatttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (421)   
   KEGG ORTHOLOGY (1)   
   RefGene (417)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (432)   

Download RDF
DBGET integrated database retrieval system