KEGG   Pseudoalteromonas marina: CPA52_04800
Entry
CPA52_04800       CDS       T06578                                 
Name
(GenBank) 23S rRNA (uridine(2552)-2'-O)-methyltransferase RlmE
  KO
K02427  23S rRNA (uridine2552-2'-O)-methyltransferase [EC:2.1.1.166]
Organism
pmaa  Pseudoalteromonas marina
Brite
KEGG Orthology (KO) [BR:pmaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pmaa03009]
    CPA52_04800
Enzymes [BR:pmaa01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.166  23S rRNA (uridine2552-2'-O)-methyltransferase
     CPA52_04800
Ribosome biogenesis [BR:pmaa03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    CPA52_04800
SSDB
Motif
Pfam: FtsJ Methyltransf_31 Methyltr_RsmB-F Methyltransf_25 Methyltransf_23 Ubie_methyltran Methyltransf_11
Other DBs
NCBI-ProteinID: ATG57612
Position
1042624..1043253
AA seq 209 aa
MTNKKQSASSQRWLKEHFDDKYVQEAQKKGWRSRAVFKLDEVQNRDKLLRPGMTVVDLGA
APGSWSQYLAEKVGDKGQVVACDILPMDSLAGVDFLQGDFREEAVLDALLKRIDGKNVDV
VLSDMAPNMSGNNSVDQAGSMYLVELALDMCNQVLKKNGAFIVKVFQGEGFDQYLQDVRN
SFKAVKIRKPDASRARSREVYIVATGYKL
NT seq 630 nt   +upstreamnt  +downstreamnt
atgacaaataaaaaacagtcagccagttcacagcgatggttgaaagaacattttgatgat
aaatatgttcaggaagcgcaaaaaaaaggctggcgttcaagagcggtttttaaattagat
gaagtacaaaatagagacaagttacttcgccctggtatgactgtggtggatttaggggct
gccccgggtagttggtcacagtatttagccgagaaggtaggtgacaaggggcaagttgtt
gcttgtgatattttacctatggactctttagcgggtgttgattttttacaaggtgacttt
cgtgaagaagccgtgttagatgctttattaaaacgcattgatggaaaaaatgttgatgtg
gtactctctgacatggcaccgaacatgagtggtaataactcagtggaccaagctggaagt
atgtatttagttgagcttgcgctagatatgtgtaatcaagttctaaagaaaaatggtgca
tttattgttaaggttttccaaggcgaaggctttgatcaatacttgcaggatgtacgtaat
agttttaaagcagtgaaaatacgcaaacctgatgcctcacgtgcccgttctcgggaagta
tatatagtagcgactggatacaaactgtag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

Download RDF
DBGET integrated database retrieval system