KEGG   Pseudoalteromonas marina: CPA52_09520
Entry
CPA52_09520       CDS       T06578                                 
Name
(GenBank) 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF
  KO
K11392  16S rRNA (cytosine1407-C5)-methyltransferase [EC:2.1.1.178]
Organism
pmaa  Pseudoalteromonas marina
Brite
KEGG Orthology (KO) [BR:pmaa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pmaa03009]
    CPA52_09520
Enzymes [BR:pmaa01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.178  16S rRNA (cytosine1407-C5)-methyltransferase
     CPA52_09520
Ribosome biogenesis [BR:pmaa03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    CPA52_09520
SSDB
Motif
Pfam: Methyltr_RsmB-F Methyltr_RsmF_N Methyltranf_PUA YebU_pre-PUA_dom Methyltransf_31 RsmF_methylt_CI NSUN5_fdxn-like
Other DBs
NCBI-ProteinID: ATG58470
Position
2064793..2066232
AA seq 479 aa
MNANTFIPEHFIDDVKTYLPNHLKLDDFINACRRPLRKSIRVNTLKITVEDFIKKAEQKN
WQLTPIPWCSEGFWLERPSNEEQNLALGNTDLHLSGAMYVQEASSMLPPIALKQSIQTSS
TVLDMASAPGSKTSQLAALMNNQGVLVANELSSSRLKVLSATLKRMGVGNCALSHFDGVI
FGNYMYECFDSILLDAPCSGEGTVRKDADALKNWSIESNIQIAQVQKDLIKSAFYALKPG
GTLVYSTCTLTPLENQQVCEYLLAEFGEFITPESLSDLFPGADKATTTEGYLHVWPQTYD
SEGFFIAKFKKHASCNNPNQTVKKGAFPFVEFDKKPTTAFMSELKKHFGLTNLPGTLMQR
DKELWLFPQGFDAIQNKIKYARLGIQIGIIHKNGVRLTHEFATVLGNACKTNTYALNSEQ
ANDYFNGKDVRLAEPTKELGEVVLTLCGCPIGLGKWQKNKIKNSLPRDLVQNTQLINWE
NT seq 1440 nt   +upstreamnt  +downstreamnt
gtgaacgccaatacttttattcctgagcactttatagacgacgtaaaaacctacctgcct
aatcatttaaagttagatgactttataaatgcgtgtcgtcgcccactcagaaaatctatc
cgcgttaatacattaaaaataaccgttgaagactttattaaaaaagccgagcaaaaaaat
tggcaacttacgccaattccttggtgtagcgaaggcttttggctagagcgcccaagtaat
gaagaacaaaacctagccctgggtaataccgatttgcatttaagcggcgccatgtacgtg
caagaggcaagttcaatgctaccgcctattgcgcttaagcaaagcatacaaacaagcagc
accgtgcttgatatggcgtcggcgccgggttctaaaacatcgcagctagcagcactaatg
aacaaccaaggcgtgttggttgctaatgagctttcgtcgtcgcgtttaaaagtattgagt
gccaccttaaaacgtatgggtgtgggtaactgtgcgctttcacactttgatggcgttata
tttggtaactacatgtatgaatgtttcgatagcatattgctagacgcgccctgctctggc
gaaggcaccgtacgtaaagatgcagacgcattaaaaaattggtcaatcgaatcaaacatt
caaatagcccaagtacaaaaagacttaataaaaagcgcattttacgcgttaaaacccggc
ggcacgcttgtttattcaacctgtacgctcaccccgctagaaaatcagcaagtatgcgaa
tatttgcttgctgaatttggcgagtttataacgcccgagtcgcttagcgatttatttccg
ggcgccgataaagcaacaacgaccgagggctatttgcacgtttggccgcaaacctacgac
agcgaaggcttttttattgccaagtttaaaaagcatgcaagctgtaacaacccaaaccaa
acagttaaaaaaggcgcgtttccgtttgttgagtttgataaaaaaccaacaactgcattt
atgagcgagcttaaaaaacactttggtttaacaaatttacccggcacattaatgcagcgc
gacaaagaactgtggttattcccgcagggatttgatgccattcaaaacaaaattaaatac
gcccgcttaggtattcaaataggcattattcataaaaatggcgtaaggctaacccacgag
tttgctacagttttaggcaatgcgtgtaaaaccaacacgtatgcgctaaatagcgaacaa
gcaaacgactactttaatggtaaagatgttcgattagccgagcctacaaaagagctaggc
gaagtggtattaactttatgcggctgccctattgggctaggtaaatggcaaaaaaataag
atcaaaaactcactaccgcgcgatctagtgcaaaatacccagttaataaactgggagtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (2)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
Protein domain (7)   
   Pfam (7)   
All databases (14)   

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