KEGG   Papilio machaon (common yellow swallowtail): 106713550
Entry
106713550         CDS       T05138                                 
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
pmac  Papilio machaon (common yellow swallowtail)
Pathway
pmac03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pmac00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    106713550
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmac03400]
    106713550
DNA repair and recombination proteins [BR:pmac03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     106713550
SSDB
Motif
Pfam: MutS_V MutS_IV MutS_I MutS_II MutS_III Nitrate_red_del Vps54 AAA_27
Other DBs
NCBI-GeneID: 106713550
NCBI-ProteinID: XP_014361861
Position
Unknown
AA seq 791 aa
MSTLQPIQALNLDSVQQRAFIKYFNSLTEKPPTTVRIFDRNEYYSVHGADATTAAREVFC
SIANIKKMGLEPDKLDYLVLSKGNFEILIRKLLLVKRYRVEIYVSEGSTKNNEWRLEYKG
SPGNLSQLEEVLGDGLGTANENAPCLMAVNFKTDAVTKGRLLGVACVTAADYQFSISEFT
DDDLLTQLETITVQTAPAECLVIQGDNKDQKALKKVMQRANVTVTKLKRSDFSTEGLIQD
LNRLLKFKNNQSQDANAFPETRKEVAMSSLAAAIRYTTLLNENTNFGRFHLTTITTAGFL
HLDAAALTALNVFPELGDISHSPTRSIYGLLDRCRTQHGKRFHLTTITTAGFLHLDAAAL
TALNVFPELGDISHSPTRSEYLVKASFDEQLQSLRSELDRLQVAAERQLRAAADSLGLDP
GKTIKLENNPQNGFYFRITNKEEHAIRGSKKFTIIDAVKGGVRFKNNSLENITDEYVQTK
DTYEREQDKVVAEIVNIASGYSECLFNLSHMISRVDVLVSMSVAACSAPLPYCRPVITDS
MEELLLSEVRHPCLEVQEGVSYIPNDVHFKRGKCVMHIITGANMGGKSTWMRSCGAAVLL
AHAVRDLYLTATPDSLVLIDELGRGTSTYEGCGIAWAIAEKLATESQCFCLFATHYHELT
RLEAQHPGVIVNSHAQASVVDGQLLLLHRIQPGAAPHSLGLHVAKLADLPDYIIQYAEEK
QSQLETNLFEIEASMKSQETSEGQEIILDFLRKCKQINESVTSDEEMMKEIDKLKRELQQ
HNSKYLQSLIA
NT seq 2376 nt   +upstreamnt  +downstreamnt
atgtctaccttacaacctattcaagctttgaacttagattcagtgcagcaacgggctttc
atcaaatactttaactccctaacagagaaaccgccaacaacagttcgtatattcgaccgc
aatgagtactacagcgttcacggcgctgatgctacgacagccgctcgcgaggtcttctgt
tctatcgctaatatcaagaagatgggtctcgaaccagataaactcgactacctcgtactc
tctaaaggaaattttgaaatacttatcaggaaacttttattggtgaagcgataccgagtt
gaaatatatgtatcggaaggatctacaaagaataacgaatggcgattagagtataaaggt
tcacctggtaatctttcgcaattagaagaggtgttaggtgacggtcttggcactgccaat
gaaaacgcaccttgcttgatggcggtcaattttaaaacggatgccgtgacgaagggtcgt
cttctaggagtggcttgtgtgacggccgccgactatcagttctctatctcggagttcaca
gacgatgatttactgacgcagctggagacaatcactgtgcagacggcgccggcggaatgt
ctcgttatacaaggcgataataaggatcaaaaagcccttaagaaggtgatgcaaagagcc
aatgtgacagtaacaaaattgaagagatcagatttctccacggaaggtctgattcaagat
ctgaatcggttgctcaagttcaaaaacaatcagtcacaagatgctaacgcattcccagag
acgcgcaaggaagtcgccatgtccagtttagctgctgccatcagatataccacattactg
aatgaaaacaccaactttggaaggttccatctgaccaccatcacaactgctggcttcctg
cacctggatgctgcagcgctgaccgcgctcaacgtattcccagaactgggcgacatctcg
cactcgcccacacgaagtatctacggtctactcgacagatgtcgcactcaacacggaaaa
cggttccatctgaccaccatcacaactgctggcttcctgcacctggatgctgcagcgctg
accgcgctcaacgtattcccagaactgggcgacatctcgcactcgcccacacgaagtgaa
tacctagtgaaggcgtcatttgacgaacagctgcagagtctacgtagtgagctggacagg
ttgcaggtggcggcggagagacagctacgagcagcagcagacagcctcggtctagatcca
ggcaagactattaagttggaaaacaatccacagaatggattttattttagaataacaaat
aaagaagagcacgcgatacgcggcagtaagaagttcacaataattgatgcggtgaaggga
ggagtcagattcaagaacaactcattggagaacatcacagatgaatatgtgcagactaaa
gacacttacgaaagggaacaggacaaagttgttgctgaaattgttaatattgcatctgga
tattccgaatgtttattcaacttatcacatatgatatcccgcgttgacgtgttggtgtca
atgtcggtggcggcttgttcagcgccgttgccatattgccggcctgtcatcactgacagt
atggaggagctgctgctcagtgaggtccgccatccctgcctggaggtgcaggaaggtgtc
tcttacatacctaatgatgttcacttcaaacgaggtaaatgcgtgatgcatataataacg
ggtgcaaacatgggcggcaagtctacatggatgaggtcgtgcggtgcggctgtgttactg
gcgcacgccgtaagagatctatacttaacggcgactcctgacagcttggtgctgatagac
gagttaggacgcggcacttccacatacgagggctgcggcatcgcctgggccatcgctgag
aaattggcaacagaatctcaatgtttctgtctattcgcgactcattatcacgagctgacg
cgtctggaggcacagcatcccggcgtcattgtgaactcgcacgcgcaggcgtctgtagtg
gacggtcagctgctgctgctgcaccgcatccagcccggcgcagcaccacactcgcttggt
ctgcacgtcgccaagctggctgatctgccggactacatcatacagtacgctgaagagaag
caatctcaactcgaaacgaatctattcgagatcgaggcgtctatgaaatctcaagaaact
tcagaaggacaagaaattatattggatttcttacgtaaatgcaaacagataaatgagagt
gtgacgtcagacgaggagatgatgaaggagattgacaagttgaaacgagagcttcaacaa
cacaacagtaaatatttgcagtctcttattgcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (42)   

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