KEGG T04988: BAY61

Prauserella marina: BAY61_11290

Entry

BAY61_11290       CDS       T04988

Name

(GenBank) 3'-5' exonuclease

K03684

ribonuclease D [EC:3.1.13.5]

Organism

pmad Prauserella marina

Brite

KEGG Orthology (KO) [BR:pmad00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pmad03016]
    BAY61_11290
Enzymes [BR:pmad01000]
3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     BAY61_11290
Transfer RNA biogenesis [BR:pmad03016]
Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    BAY61_11290

SSDB

Motif

Pfam:

DNA_pol_A_exo1 DNA_pol_A_exoN HRDC

Other DBs

NCBI-ProteinID:

ASR35488

UniProt:

A0A222VNJ9

Position

complement(2458193..2459434)

AA seq 413 aa
MENADHGSEVPEESAPIPLTEPAGGTPPVVADVAALREACRRLAEGSGSVAVDTERASGY
RYWPKAYLVQIRREGAGTFLVDPIPLRDELAPLADVLGTTEWVLHAASQDLPCLDELDLR
PPSLFDTELAGRLAGYERVALGTLVEALLGYQLEKGHSAADWSKRPLPQDWLNYAALDVE
LLVPLREKLEAELSAQGKLEWARQEFEAVRLAPAPAPRAEPWRRTSGIHKIRTARGLAAV
RALWEARDELARKRDRAPSRILPDSAIVNAVLSDARTATDLQALPVFGGRVQRRYTSNWL
RHLQASRTLPQSELPSPSVPNDGPPPPNRWADKDPDAAARLAAARAALTGIAEHHRLPVE
NLLLPDLLRRTCWRPPDDRSPEGVAAVLAEHGARPWQIELTANEISKALHVQA

NT seq 1242 nt +upstreamnt +downstreamnt
gtggaaaacgcagatcacggctccgaggtgccggaggagtctgcgcccataccgctcacc
gaacccgctgggggtaccccaccggtcgtcgccgatgtcgccgcgctacgcgaggcgtgt
cggcggctggccgagggaagcggctccgtcgccgtggacaccgagcgcgcgtccggctac
cggtactggccgaaggcatacctggtgcagatccggcgcgagggcgccggcacgttcctc
gtcgatcccattccgcttcgcgacgagctcgcgcctctggccgacgtgctcggcacgacc
gagtgggtgctgcacgccgcgtcccaggacctgccgtgccttgacgaactggacctgcgc
ccgccttcgcttttcgacaccgagctggccggacgcctcgccggatacgagcgcgtcgcg
ctgggcacgctcgtcgaggcactactcggctaccagctcgaaaaaggccacagcgccgcc
gactggtcgaagcggccccttccgcaggactggctcaactacgcggcgctggacgtcgag
ctgctggtcccgctgcgggagaaactggaagcagagctgtcggcacagggcaagctggag
tgggcgcggcaggagttcgaagccgtccggctcgctccggcccccgcgccgagggccgag
ccatggcggcggacctcgggcatccacaagatccgcaccgcgcggggactcgccgcggtc
agggcgctgtgggaggcccgtgacgagctggcccgcaagcgtgaccgggctccgagccgg
atcctgccggacagcgccatcgtcaacgcggtgctctccgacgcgcgtaccgcgaccgac
ctgcaagcactaccggtgttcggtggcagggtgcagcgcagatacaccagcaactggctg
cggcacttgcaggcctcgcgcaccctcccgcagagcgagctaccgagcccgtcggtgccc
aacgacggaccgcctccacccaaccggtgggccgacaaggaccccgacgcggcggcccgg
ctcgcggcggcacgggcggcgctgaccggcatcgccgagcatcaccggctacccgtggag
aacctgctgcttcccgacctgctgcggcgcacctgctggcggccgcccgacgaccgctcc
cccgagggggtcgccgccgtactggccgagcacggcgcccggccgtggcagatcgagctg
accgcgaacgagatcagcaaagccctgcacgttcaggcgtga

All links

Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (3)   
   Pfam (3)   
All databases (18)   

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