KEGG   Paraphotobacterium marinum: CF386_01255
Entry
CF386_01255       CDS       T05093                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pmai  Paraphotobacterium marinum
Pathway
pmai03030  DNA replication
pmai03430  Mismatch repair
pmai03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmai00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    CF386_01255
   03430 Mismatch repair
    CF386_01255
   03440 Homologous recombination
    CF386_01255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmai03032]
    CF386_01255
   03400 DNA repair and recombination proteins [BR:pmai03400]
    CF386_01255
Enzymes [BR:pmai01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     CF386_01255
DNA replication proteins [BR:pmai03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     CF386_01255
DNA repair and recombination proteins [BR:pmai03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     CF386_01255
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: ASK77799
UniProt: A0A220VBT6
Position
large:complement(232192..232839)
AA seq 215 aa
MSDRIVILDTETTGMNKSGSQVSLGHNIIEIGAVEVINRKLTGNNFHVYIKPPRKIDREA
IEVHGITDIFLDDKPFFKDVCGEFLQYLQNSEIVAHNAPFDLMFLNSEIQKVKCDKNFLL
ENTCKVTDSLMLAKKKYPGKRNNLDALCSRLGIDNSKRVQHGALLDSEILADVYLLLTGG
QINLLFNNEINSNKHSEEYVFEELNSKIEIKFFLS
NT seq 648 nt   +upstreamnt  +downstreamnt
atgtcagatagaattgtaattttagatacagaaaccacaggaatgaataaaagtggctca
caagtatcccttggccataatattatcgaaattggtgcagtcgaagtaataaatagaaag
ctgactggaaataatttccatgtctacataaaaccacctagaaaaattgatcgtgaagca
atagaagtacatggaatcacagatatttttctagatgataagcctttttttaaagatgtg
tgtggtgagtttcttcaataccttcaaaattctgaaattgttgctcataatgcacctttt
gatttaatgtttctaaacagcgaaatacaaaaagtgaaatgtgataaaaattttttactt
gaaaacacatgtaaagtaactgatagcttaatgttagccaaaaagaaatatcctggaaaa
agaaataatttagatgcattatgtagtagacttggtattgataattctaaaagggttcaa
catggagcattacttgactctgaaattttagctgatgtttatttattattaaccggtggt
caaattaatttattgtttaataacgaaatcaattcaaataagcattcagaagaatatgtt
tttgaagagttaaactcaaaaatagagataaaattttttctaagctag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (4)   
   Pfam (4)   
All databases (22)   

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