KEGG   Parus major (Great Tit): 107201299
Entry
107201299         CDS       T04864                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj04512  ECM-receptor interaction
pmaj04514  Cell adhesion molecules
pmaj04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    107201299 (SDC1)
   04514 Cell adhesion molecules
    107201299 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    107201299 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pmaj04131]
    107201299 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:pmaj04090]
    107201299 (SDC1)
   00535 Proteoglycans [BR:pmaj00535]
    107201299 (SDC1)
Membrane trafficking [BR:pmaj04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    107201299 (SDC1)
CD molecules [BR:pmaj04090]
 Proteins
  107201299 (SDC1)
Proteoglycans [BR:pmaj00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   107201299 (SDC1)
SSDB
Motif
Pfam: Syndecan Glycophorin_A
Other DBs
NCBI-GeneID: 107201299
NCBI-ProteinID: XP_033368829
Ensembl: ENSPMJG00000012496
Position
3:complement(103513199..103537985)
AA seq 364 aa
MALLPLPPRLRAPFRGNLAPECCARCFRSVLAAWAPSSPVCGRRLWTWTLLAHMAVSRYE
VAKNFEHHIFLLFSLKQTTNLNLPPEDLDSSGDEDDTFSGSGAGPLTDQSHTWRIPGDST
NSSVLVAPVDFSEQPFPGIESRTEKEVISPSATSSLVTEEPAVAVKDEVPLLGSPDGKPT
SHIVTTTVRTPTAHFPSVAHVTPSEASAVVHEPKIPSSDVPDTKDVPEPHSTVHPEGDSA
ATPAATAPKDVVPTHEEVSEDGSGDPGDFILTKEEDFVPTQNSEVLPDSERNAKAAGASG
IMDRKEVLGGVIAGGLVGLVFAVFLVAFMLYRMKKKDEGSYSLDEPKQSNGGYQKPHKQE
EFYA
NT seq 1095 nt   +upstreamnt  +downstreamnt
atggctctgctcccgctcccgccccgcctgcgggcgcctttccgcggaaacctggctccg
gagtgctgtgctcgctgcttcaggtctgtgctggcagcctgggcgccgtcgagccccgtg
tgcggtcggaggctctggacatggacactcctagcccacatggcagtgagtcgttatgag
gtggctaaaaatttcgaacatcacatctttttgctcttctctttaaagcaaactacaaat
ctgaaccttccccctgaagaccttgattcttctggtgatgaagatgacacgttctcaggt
tcaggtgcaggtcccttgactgaccagtctcacacctggagaatcccaggagattcaact
aattcctcagtactggtagcaccagtggatttcagtgaacagccatttcctgggattgag
agcagaactgaaaaggaagtaatatctccttctgcaaccagtagcctagtgacagaggaa
ccagctgtagctgtgaaggatgaagtacccctcctgggctcacctgatgggaaaccaaca
agccacatagtcacaacaacagtgagaacccccactgctcacttcccttctgtggctcat
gtgactccttcagaagcctctgctgtggtccatgaacccaaaatccccagctctgatgtg
ccagacaccaaggacgtgcctgagccccactctactgtccatcctgagggagacagtgct
gccacccccgcggccacagctccaaaggatgtcgttcctacacatgaggaggtttctgaa
gatggctctggagacccgggagacttcatcttgactaaagaagaggattttgtccccaca
cagaactcagaagtgctgcctgactctgaaaggaatgccaaagcagcaggagcctcggga
attatggacagaaaagaagttcttggaggtgttattgctggaggacttgtaggcttggtg
tttgcagtgtttctagttgcatttatgctgtacagaatgaagaaaaaagatgaaggcagc
tattcactggatgaaccaaaacagtctaacggaggataccaaaaaccacacaaacaagag
gaattctatgcataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (2)   
   Pfam (2)   
All databases (17)   

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