KEGG   Parus major (Great Tit): 107207696
Entry
107207696         CDS       T04864                                 
Symbol
ERCC3
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB isoform X1
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj03022  Basal transcription factors
pmaj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    107207696 (ERCC3)
  09124 Replication and repair
   03420 Nucleotide excision repair
    107207696 (ERCC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmaj03021]
    107207696 (ERCC3)
   03400 DNA repair and recombination proteins [BR:pmaj03400]
    107207696 (ERCC3)
Enzymes [BR:pmaj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     107207696 (ERCC3)
Transcription machinery [BR:pmaj03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     107207696 (ERCC3)
DNA repair and recombination proteins [BR:pmaj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     107207696 (ERCC3)
SSDB
Motif
Pfam: ERCC3_RAD25_C Helicase_C_3 ResIII Helicase_C DEAD SNF2-rel_dom AAA_22 AAA_34
Other DBs
NCBI-GeneID: 107207696
NCBI-ProteinID: XP_015490773
Ensembl: ENSPMJG00000019770
Position
7:23615818..23635723
AA seq 780 aa
MGRKERDKKKSKKRHYDDDEDDEDEGAGKEPQEAVPSAAGKQVEESGTKVDEYGAKDYRL
QMPLKADHSSRPLWVAPDGHIFLEAFSPVYKYAQDFLVAIAEPVCRPTHIHEYKLTAYSL
YAAVSVGLQTSDITEYLQKLSKTGVPDGIIQFIKLCTVSYGKVKLVLKHNRYFVESTHPD
VIQQLLQDHVIKECRLRNAEGEETELITETFTSKSVISKSSEAGLGPSTSQGTDAQNKPD
VPADLFEFYEQMDKDEEEEEETQTVSFEVKQEMIEELQKRCIHLEYPLLAEYDFRNDSVN
PDINIDLKPTAVLRPYQEKSLRKMFGNGRARSGVIVLPCGAGKSLVGVTAACTVRKRCLV
LGNSAVSVEQWKAQFKMWSTIDDSQICRFTSDAKDKPIGCSVAISTYSMLGHTTKRSWEA
ERVMEWLKSQEWGLMILDEVHTIPAKMFRRVLTIVQAHCKLGLTATLVREDDKIVDLNFL
IGPKLYEANWMELQNSGYIAKVQCAEVWCPMSPEFYREYVAIKTKKRILLYTMNPNKFRA
CQFLIKFHERRNDKIIVFADNVFALKEYAVRLGKPYIYGPTAQGERMQILQNFKHNPKIN
TIFISKVGDTSFDLPEANVLIQISSHGGSRRQEAQRLGRVLRAKKGMVAEEYNAFFYSLV
SQDTQEMAYSTKRQRFLVDQGYSFKVITKLAGMEDEELSFSTKEEQQQLLQKVLQASDLD
AEEEVVAGEYGSKSAQVSRRTGTMSSMSGADDTVYMEYHSSRSKASSNKHIHPLFKRFRK
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgggcaggaaggagcgggataagaagaagtccaagaagcgccattacgatgacgacgaa
gacgatgaggacgaaggtgccgggaaggagccgcaggaggcggtgccgtcggcggcgggc
aagcaggtggaggagagcggcaccaaggtggacgagtacggcgccaaggactaccggctg
cagatgcccctgaaggctgaccacagctcgcggcccctctgggtggctcctgatggccat
atatttttggaagcattttctccagtttacaaatatgcccaggactttctggttgccatt
gctgagcctgtgtgcagacccacccatattcacgagtacaagctgactgcttactcccta
tatgctgctgtgagtgtgggcttacagacaagtgacatcactgagtatttgcagaaactc
agcaagactggtgtcccagatggaataattcagtttatcaagctgtgcaccgtcagctat
gggaaggtgaagttggttctgaaacataacaggtattttgtggaaagtacccaccctgat
gtcattcagcagcttctgcaagaccacgtaattaaagaatgtcgtctgagaaatgctgaa
ggtgaagagacagagctcattacagagacattcacaagtaaatcagtgatttccaaatcc
agtgaagctggccttggtccatcaacttcacagggaacagatgctcagaataagccagat
gtcccagctgacttatttgagttttatgaacagatggacaaagatgaggaggaggaggag
gaaacgcagacagtgtcttttgaagtcaagcaggagatgattgaagaacttcagaagcgt
tgtatccatttggagtaccccttactggcagaatatgatttcagaaatgattctgtgaat
cctgatatcaatatagatttgaaacctactgcagttctgagaccctatcaagagaaaagc
ctaagaaagatgtttgggaatggacgagccaggtctggagttattgtcttgccatgtggt
gctggcaagtctctggtgggagtgacagctgcatgcactgtgcgcaagcggtgcctggtg
ctcgggaattctgccgtgtctgtggagcagtggaaggcccagttcaagatgtggtccacc
attgatgacagccagatctgtcgcttcacatctgatgccaaagacaagcccattggctgt
tctgttgccatcagcacatactccatgttggggcacacgacaaaaaggtcttgggaagca
gaaagagtaatggagtggcttaaaagtcaagagtggggccttatgatactggatgaagtc
cataccatccctgcaaaaatgttcagacgtgtgctcactattgtacaagctcactgtaaa
ctggggctgactgctaccctggtcagagaagatgataaaattgttgacctgaacttcctg
attggaccaaagctctatgaagccaactggatggagctgcagaacagtggctacattgct
aaagtccagtgtgctgaggtctggtgcccaatgtcacctgaattttacagagaatatgta
gcaattaaaaccaagaaaaggatactgctctacaccatgaacccaaataaattcagagcc
tgtcagtttctgattaagtttcatgagcgacggaatgataaaatcatcgtctttgctgac
aatgtgtttgcactgaaggaatatgcagtcagacttgggaaaccctatatctatggtccc
actgcacaaggggaaagaatgcaaattctacaaaacttcaagcacaatccaaaaatcaac
actattttcatctccaaggtgggggacacatccttcgatctgccagaagccaatgttctc
attcagatctcatcccatggtgggtcacgaaggcaggaggctcaaagactgggacgagtg
ctgagagccaaaaaaggcatggttgcagaggaatacaatgcctttttttattcccttgta
tcccaagacactcaggaaatggcatattcaacaaaacggcaacggtttcttgtagatcaa
ggttatagcttcaaggtaatcacaaagctggcaggcatggaagacgaagaactttcattt
tcaaccaaagaagaacaacagcagcttctccagaaagtcctgcaagcatctgacctggat
gctgaggaggaagtagttgctggagaatatggttcaaagtcagctcaggtgtcccgtcgt
acaggcaccatgagctccatgtctggagcagatgacacggtttacatggaataccactcc
tcacggagcaaagcttcttctaacaaacacatccaccccctgttcaaacgcttccggaag
tga

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Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (2)   
   RefSeq(nuc) (2)   
Protein domain (8)   
   Pfam (8)   
All databases (25)   

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