KEGG   Parus major (Great Tit): 107211819
Entry
107211819         CDS       T04864                                 
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55
  KO
K14809  ATP-dependent RNA helicase DDX55/SPB4 [EC:3.6.4.13]
Organism
pmaj  Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pmaj03009]
    107211819 (DDX55)
Ribosome biogenesis [BR:pmaj03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    107211819 (DDX55)
SSDB
Motif
Pfam: DEAD Helicase_C DUF4217 ResIII Helicase_C_2 SBF_like SHOCT AAA_22
Other DBs
NCBI-GeneID: 107211819
NCBI-ProteinID: XP_015499809
Ensembl: ENSPMJG00000002723
Position
15:complement(2234517..2241873)
AA seq 596 aa
MEAVTEGSWSSLPVPLSPGVLRALRELRFHQMTPVQSATIPLFMSNKDVAAEAVTGSGKT
LAFVIPILEILLRREEKLKKMQVGAIIITPTRELAIQIDEVLSHFTKHFPMFSQILLIGG
RNPMEDVEKFKEHGGNIIVATPGRLEDLFRRKADGLDLASCVKALDVLVLDEADRLLDMG
FEASLNAILDFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRISVKEKGVAASNTQKTPT
RLENYYMICKADEKFNQLVHFLRQHKQEKHLVFFSTCACVEYYGKALESLIKQVKIMSIH
GKMKHKRNKIFTEFRKLPGGILVCTDVMARGIDIPEVHWVLQYDPPSSASAFVHRCGRTA
RIGNVGSALVFLLPMEESYINFLSINQKCPMQEMKPQTNVLDLLPKLKSMALADRAVFEK
GMKAFVSYVQAYAKHECNLIFRIKDLDFASLARGFALLKMPKMPELRGKCFPDFTPVTVN
TDSISFKDKNREKQRQKKLEEQRKEREENQGKKKFVKNKAWSKQKAKREKKKKVTAKRKR
EEGSDIEDEDMEELLNDTRLLKRLKKGKISEEEFEKKLTGNQRLKAETVEDNESEG
NT seq 1791 nt   +upstreamnt  +downstreamnt
atggaggcggtgactgagggcagttggagctcgctgccggtgccgctgagcccgggcgtg
ctgcgggcgctgcgggagctccgcttccaccaaatgaccccggtgcagtctgcgaccatc
ccgctcttcatgagtaacaaagatgtggctgcagaagcggtcacaggcagtgggaaaacc
ttggcgtttgtgattcccatactggaaattcttctcagacgggaagaaaaattaaagaaa
atgcaggttggagctataattatcacaccaacgagggaattggccattcaaattgatgag
gtgctgtcacatttcacaaaacacttccccatgttcagtcagattcttttaattggtgga
aggaaccccatggaagatgttgaaaagtttaaggagcatggtgggaacatcatcgtggcc
accccgggccgcctggaggatctgttcaggagaaaagcagatgggctggaccttgcaagc
tgtgtgaaggctctggatgtgctggtgttggatgaagcagacagacttctagatatgggc
tttgaagcaagcttaaatgccattctggactttttgcccaagcagagaaggacaggtctg
ttctcagccacccagacccaggaggtggagaatctggtgagagcagggctgcggaaccct
gtccgcatctcggtcaaggagaagggagtggcagccagcaacacccagaaaacccccaca
cgcctggagaactattacatgatctgcaaggcagatgaaaaatttaaccagttggtgcat
tttcttcggcagcacaaacaggaaaaacatctggtctttttcagcacgtgtgcctgcgtg
gagtactatgggaaggctctggaatccttaattaaacaggtgaaaataatgagcatccat
gggaaaatgaagcacaaacgtaacaagattttcacagagtttcggaagctcccggggggc
attttggtgtgcacagatgtgatggctcgtggcattgacattccagaagtgcactgggtg
ttgcagtatgacccacccagcagtgccagtgccttcgtgcatcgctgtggtcgcacggca
cggatcggcaacgtgggcagtgcactggtctttttgcttcccatggaagaatcctacatt
aactttctctcaatcaaccaaaagtgtcccatgcaggaaatgaaaccacagacaaatgtg
ttggatcttcttcccaagctgaagtccatggccctggctgacagggcagtgtttgagaaa
gggatgaaagcctttgtgtcttacgtccaggcttatgccaaacacgaatgtaatctgatc
ttccggatcaaagatctggattttgccagtcttgccagaggttttgcattgttaaaaatg
ccaaagatgcctgaactaagaggaaaatgtttcccagactttactccagtcactgttaat
acagactccatttcatttaaggataaaaacagagaaaagcagagacaaaagaaattagaa
gaacaaagaaaagaaagagaggaaaatcaagggaaaaagaaatttgtgaagaacaaagca
tggtcaaagcagaaagccaagagggagaagaaaaagaaagtaacagctaagaggaagcgt
gaagagggctctgatattgaagatgaggatatggaagagttgctgaatgacacaagactc
ttgaaaagattaaaaaagggaaaaattagtgaagaagagtttgagaagaaactaacaggc
aaccaaaggctcaaagcagaaactgttgaggacaatgagtctgaaggctga

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Ontology (2)   
   KEGG BRITE (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (19)   

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