KEGG   Parus major (Great Tit): 107215652
Entry
107215652         CDS       T04864                                 
Symbol
SCN8A
Name
(RefSeq) sodium channel protein type 8 subunit alpha
  KO
K04840  voltage-gated sodium channel type VIII alpha
Organism
pmaj  Parus major (Great Tit)
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:pmaj04040]
    107215652 (SCN8A)
Ion channels [BR:pmaj04040]
 Voltage-gated cation channels
  Sodium channel, voltage-gated (Nav)
   107215652 (SCN8A)
SSDB
Motif
Pfam: Ion_trans Na_trans_cytopl Na_trans_assoc PKD_channel GPHH IQ ATP-synt_B Lustrin_cystein
Other DBs
NCBI-GeneID: 107215652
NCBI-ProteinID: XP_033376109
Ensembl: ENSPMJG00000014704
Position
LGE22:266485..320453
AA seq 1789 aa
MAARLLAPPGPESFKPFTPESLANIEKHIAEMKKKQRSKQDSSHRDDDEDSKPKPNSDLE
AGKNLPFIYGDIPKGLVAVPLEDFDPYYMTQKTFVVLNRGKTLFRFSATPALYILSPFNL
FRRIAIKILIHSYPFYYRVTFVESLEISLPLSFVQFTNQNASPACGLVSEKTQNPGFYWM
KNTTISYKETIDTKGGDANSAINSGLILQVYNRVCKPRQCFSSAHFQGSESFENYFCNSR
YVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVMILTVFCLSVF
ALIGLQLFMGNLRNKCVIWPINVNETFLDNGSRGFDWEEYTNNMSNFYIIPGAPDPLLCG
NSSDAGQCPEGYTCMKAGRNPNYGYTSFDTFSWAFLALFRLMTQDFWENLYQLTLRAAGK
TYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATLEEAEQKEAEFKAMLEQLKKQQEE
AQSPQSLLSIPGSPFLSRHNSKSSIFSYKGRFRDPVSENEFADDEHSTVEESEGRRDSLF
IPIRGRDRRSSYSGYSGYSQGSRSSRIFPTLRRSVKRNSTVDCNGVVSLIGRPPSSMPGG
RILPEGTTEIEIRKKPGGSLLVSMDQVNASYGRKDRTNSVMTGLTNTLVEELEESQRKCP
PCWYKFANTFLIWECHPYWMKLKEIVNLIVMDPFVDLAITICIVLNTLFMAMEHHPMTPE
FEHVLSVGNLVFTGIFTAEMFLKLIAMDPYYYFQEGWNIFDGFIVSLSLMELSLADVEGL
SVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKS
YKECVCKINPECELPRWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQAMCLIVFMMV
MVIGNLVVLNLFLALLLSSFSADNLAATDDDGEMNNLQISVIRIKKGIAWTKAKVREFMQ
AHFKQREADEVKPLDELYDKKVNCIANHTGADINRDIDFQKNGNGTTSGIGSSVEKYIID
EDHMSFINNPNLTVRVPIAVGESDFENLNTEDFSSDTDPDGSKEVSWTSRGAFGALRDTG
QVLVSLVSLIANALGYSELGAIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNV
LLVCLIFWLIFSIMGVNLFAGKYHYCFNETAEHRFEIDVVNNKTDCEALMPPNSTEIRWK
NVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRKQEEQPKYEDNIYMYIYFVIFIIF
GSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPLNR
VQGAVFDFVTQQAFDIVIMMLICLNMVTMMVETDTQSKQMEDILYWINFVFVIFFTCECV
LKMFALRHYYFTIGWNIFDFVVVILSIVGMFLAEIIEKYFVSPTLFRVIRLARIGRILRL
IKGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIFSIFGMSNFAYVKHEAGIDDMFNFET
FGNSMICLFQITTSAGWDGLLLPILNRPPDCDLDKEHPGSGFKGDCGNPSVGIFFFVSYI
IISFLIVVNMYIAIILENFSVATEESADPLSEDDFETFYEIWEKFDPDATQFIEYSKLAD
FADALEHPLRVPKPNTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDILRQQME
ERFVASNPSKVSYEPITTTLRRKQEEVSAVVIQRAYRARLARRGFISRRPAASKLENGGA
NREKKEGTPSTASLPSYDSVTKPEKEKQQRAEEGRREKAKRQKDREHKC
NT seq 5370 nt   +upstreamnt  +downstreamnt
atggcagcgcggctgctggcaccaccgggccccgagagttttaaacccttcactccggag
tcgctggccaacatcgagaagcacatcgcggagatgaagaagaagcagcgctccaagcag
gacagcagccaccgcgatgacgacgaggacagcaaaccaaaaccaaacagtgaccttgag
gcgggcaagaacttgcctttcatctacggggacatccctaaagggctggttgctgtgcca
ctggaggactttgacccttattacatgacccagaaaacctttgtagtactaaacagaggg
aaaacactcttccgatttagtgccacacctgccttgtacattttaagtccttttaatctc
tttagaagaatagctattaaaattttgatacattcatatcctttttattaccgagttacc
tttgtggaatccctggaaatctctttacctttgtcttttgttcagttcacaaatcaaaat
gccagtcctgcatgtgggttggtgtcagaaaagacacaaaatccaggtttttattggatg
aaaaacacaacaatttcctacaaagaaacaattgatacaaagggaggtgacgccaacagc
gccattaactctggtttaattctgcaggtatataacagagtttgtaaacctaggcaatgt
ttcagctctgcgcactttcagggttctgagagctttgaaaactatttctgtaattccaga
tatgtcacagagtttgtggaccttgggaatgtctcagcattgagaactttcagagttctc
cgagctttgaaaactatctctgtaattccaggcttgaagaccatcgtgggtgccctgatc
cagtctgtgaagaagctgtcggacgtgatgatcctgacagttttctgtctcagtgtcttc
gccctcatcgggctccagctcttcatgggcaatttaaggaacaaatgtgtgatttggcca
attaatgtcaacgagacctttctggataacggctccaggggctttgactgggaggaatac
accaacaatatgtcaaatttttacatcattcctggcgcccctgaccctttgctctgtggt
aacagctcagatgcagggcaatgccccgagggctacacgtgcatgaaggcgggacggaac
cccaactacggctacaccagcttcgacaccttcagctgggctttcctggctttatttcgc
cttatgactcaggacttctgggaaaacttgtatcaattaactttacgagcggcaggaaaa
acctacatgatcttctttgtgctggtgatcttcgtggggtccttctacctggtgaatctg
atcctggccgtggtggccatggcctacgaggagcagaaccaggccaccctggaggaggca
gagcagaaggaggcagaattcaaggccatgctggagcagttgaaaaagcaacaggaagaa
gcacagtctccccagtctctcctcagcatcccgggctcccctttcctctcccgccacaac
agcaagagcagcatcttcagctacaagggccgcttccgcgacccggtgtcggagaacgag
tttgcggacgacgagcacagcacggtggaggagagcgagggcaggagggactcgctcttc
atccccatccgcggccgcgaccggcgcagcagctacagcggctacagcggctacagccag
ggcagccgctcctcgcgcatcttccccacgctgcgccgcagcgtcaagaggaacagcacc
gtggactgcaacggcgtcgtctcgctcatcggcaggccgccctccagcatgcccgggggt
cgcatcctgcccgagggcaccaccgaaatcgaaatcaggaagaagcctggcgggtctctc
ctggtctccatggaccaggtgaacgcgtcctacggaaggaaggatcggaccaacagcgtc
atgaccgggctgaccaacaccctcgttgaggagctggaggagtcccagaggaagtgtccc
ccttgctggtacaaattcgccaacaccttcctgatctgggagtgccacccctactggatg
aagctgaaggagattgtgaatttaattgtgatggatccgttcgttgacctggccatcacc
atctgcatcgtgctgaacacgttgttcatggccatggagcaccaccccatgacccccgag
ttcgagcacgtgctctccgtgggaaacctggttttcactgggattttcacagcagaaatg
ttcctcaagctcattgcgatggatccatactattattttcaagaaggctggaacatcttt
gatgggtttattgtctccctcagtttgatggagctgagtctggcggatgtggaagggctc
tccgtgctgcgatctttccgattgctgagagtcttcaaactggccaaatcctggcccact
ctgaacatgctgataaaaatcattggtaactcagtgggtgccttggggaatttgaccttg
gtgctggccatcatcgtcttcatcttcgccgtggtggggatgcagctctttggcaaaagc
tacaaggagtgtgtctgcaagatcaatccggagtgtgagctaccccgctggcacatgcac
gatttcttccactccttccttattgtcttccgtgtgttgtgtggggagtggattgagacc
atgtgggattgtatggaagtggcaggccaggccatgtgcttgattgtcttcatgatggtc
atggtcatcggaaatttagtggtgctgaacctgttcttggccttgctgctgagctccttc
agcgccgacaacctggcggccacggacgacgacggggagatgaacaacctgcagatctcg
gtgatccgcatcaagaagggcatcgcctggaccaaggccaaggtgcgcgagttcatgcag
gctcacttcaagcagcgggaggcggacgaggtgaaacccctggacgagctgtacgacaag
aaggtgaactgcatcgccaaccacaccggcgccgacatcaaccgcgacatcgacttccag
aagaacggcaacggcaccaccagcggcatcgggagcagcgtggagaaatacatcatcgac
gaggaccacatgtccttcatcaacaaccccaacctgaccgtgcgcgtgcccatcgccgtg
ggcgagtccgacttcgagaacctcaacacggaggatttcagcagcgacacggatcccgac
ggcagcaaggaggtgagctggacgtcccgcggggccttcggcgcgctgcgagacacggga
caggtcttggtctctttagtcagccttatagctaatgccctgggctactcggaactaggt
gccataaaatcccttaggacactaagagccttgaggcctttaagagcgttatcccgattt
gaggggatgagggtggttgtcaacgccttggttggcgctatcccttccattatgaatgtc
ttgttggtctgccttatcttctggctgattttcagcattatgggggttaacctgtttgcc
gggaaatatcattactgctttaatgaaacagctgagcatcgctttgagatagatgttgtt
aacaacaagacagactgcgaagctctgatgcctcccaactccaccgagatccgctggaag
aatgtgaaaattaactttgacaatgttggggcaggatatctggctctgctgcaggtggct
acattcaagggctggatggacatcatgtacgcagctgttgattccagaaagcaagaagaa
cagcccaagtacgaggacaacatttacatgtacatttacttcgtcatcttcatcatcttc
ggttcctttttcaccctcaatttgttcatcggcgtcatcatcgacaacttcaatcaacag
aagaaaaagtttggaggtcaagacattttcatgacagaagaacaaaagaaatactacaat
gccatgaaaaaactgggctccaaaaagcctcaaaaacccattccccgacctctgaaccgc
gtccagggcgccgtcttcgacttcgtcacgcagcaagccttcgacatcgtcatcatgatg
ctcatctgcctcaacatggtgaccatgatggtggagacggacacgcagagcaagcagatg
gaggacatcctctactggatcaacttcgtcttcgtcatcttcttcacctgcgagtgcgtg
ctgaagatgttcgccctgcgccactactacttcaccatcggctggaacatcttcgacttc
gtggtggtcattctgtccatcgtggggatgttcctggccgagatcatcgagaagtacttc
gtgtcccccaccctgttccgagtcatccgcctggctcgcatcggccgcatcctgcgcctg
atcaagggagccaaggggatccgcacgctgctttttgccttaatgatgtccctgcccgcc
ctgttcaacatcggcctcctgctcttcctggtcatgttcatcttctccatcttcggcatg
tccaacttcgcctacgtcaagcacgaggccggcatcgacgacatgttcaacttcgagacc
ttcggcaacagcatgatctgcttgttccagatcaccacgtcggcgggctgggacgggctc
ctgctgcccatcctcaaccgcccgcccgactgcgacctggacaaggagcacccgggcagc
ggcttcaagggggactgcgggaacccctcggtggggatcttcttcttcgtcagctacatc
atcatctccttcctcatcgtggtcaacatgtacatcgccatcatcctggagaacttcagc
gtggccacggaggagagcgccgacccgctgagcgaggacgacttcgagaccttctacgag
atctgggagaagttcgaccccgacgccacgcagttcatcgagtacagcaagctggcggat
ttcgccgacgccctggagcacccgctgcgcgtccccaagcccaacaccatcgaactcatc
gccatggacctgccgatggtgagcggggacaggatccactgcttggacatcctgtttgcc
ttcaccaaacgcgtgctgggggacagcggggagctggacatcctgaggcagcagatggag
gagaggttcgtggcttccaacccttccaaagtgtcttatgagcccatcaccaccacgctg
cggcgcaagcaggaggaggtgtcggccgtggtgatccagagggcctacagggctcgtttg
gcgcgacgaggattcatcagccggagacccgccgcctccaaactggaaaacgggggagca
aaccgggagaaaaaggaaggaaccccgtccacggcgtcgctgccctcctacgacagcgtc
accaaacccgagaaggagaaacagcagcgggcggaggaagggaggagagaaaaggcaaag
agacaaaaagacagggaacacaagtgttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (1)   
   RefSeq(nuc) (1)   
Protein domain (8)   
   Pfam (8)   
All databases (18)   

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