KEGG   Parus major (Great Tit): 107216320
Entry
107216320         CDS       T04864                                 
Symbol
TNPO1
Name
(RefSeq) transportin-1 isoform X1
  KO
K18752  transportin-1
Organism
pmaj  Parus major (Great Tit)
Pathway
pmaj03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:pmaj00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    107216320 (TNPO1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmaj03019]
    107216320 (TNPO1)
   03009 Ribosome biogenesis [BR:pmaj03009]
    107216320 (TNPO1)
Messenger RNA biogenesis [BR:pmaj03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     107216320 (TNPO1)
Ribosome biogenesis [BR:pmaj03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    107216320 (TNPO1)
  Pre-60S particles
    107216320 (TNPO1)
SSDB
Motif
Pfam: HEAT_EZ HEAT HEAT_2 Arm IBN_N Vac14_Fab1_bd Cnd1 PDS5 Adaptin_N CEP104-like_TOG MMS19_C Dopey_N RTP1_C1 UNC45-central DUF3689
Other DBs
NCBI-GeneID: 107216320
NCBI-ProteinID: XP_015508783
Ensembl: ENSPMJG00000016180
Position
Z:complement(24742474..24811921)
AA seq 890 aa
MEYEWKPDEQGLQQILQLLKESQSPDTTTQRAVQQKLEQLNQYPDFNNYLIFVLTKLKSE
DEPTRSLSGLILKNNVKAHFHNFPNGVTDFIKSECLNNIGDSSPLIRATVGILITTIASK
GELQNWPELLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPLNIMIPKFL
QFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVRKNVCRALV
MLLEVRMDRLLPHMISIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKEVLCRHLTKL
IPVLVNGMKYSEIDIILLKGDVEEDEAIPDSEQDIRPRFHRSKTVAQQHEEDGIEDDDDD
DDELDDDDTISDWNLRKCSAAALDVLANVFRDELLPHILPLLKELLFHPEWVVKESGILV
LGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQPPDTYLKP
LMTELLKRILDSNKRVQEAACSAFATLEEEACTELVPYLAYILDTLVFAFSKYQHKNLLI
LYDAIGTLADSVGHHLNKPEYIQMLMPPLIQKWNMLKDEDKDLFPLLECLSSVATALQSG
FLPYCEPVYQRCVNLVQKTLAQAMLHNAQPDQYEAPDKDFMIVALDLLSGLAEGLGGNIE
QLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIADFMPILGTNLNPE
FISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTLLENTAITIGRLGY
VCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMITVNPSGVVQDFIFFCDAVA
SWISPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAYYGV
NT seq 2673 nt   +upstreamnt  +downstreamnt
atggagtacgagtggaagcccgacgagcaggggctccagcagatcttgcagcttctcaag
gagtcccagtccccggacaccacgacgcagagagccgtgcaacaaaaactagaacaactc
aatcagtatccagatttcaacaactacctgattttcgttcttacgaagttgaagtctgaa
gatgagccaacacgttccttgagtggtcttatcttgaagaataatgtaaaagcacatttt
cacaactttccgaatggggtaactgacttcattaaaagtgaatgtctgaacaacattggt
gattcctcccccttaattagagctactgtaggcattctgataacaaccattgcctcaaaa
ggggagttacagaattggcctgaactcttgccaaagctttgcagcctgttggattctgaa
gattacaatacctgtgagggtgcttttggcgctcttcaaaagatatgtgaagattctgct
gaaattttagatagtgatgtgttggaccggccactcaatatcatgataccgaagttcttg
cagttcttcaagcatagcagtccaaaaatacggtctcatgcagtggcatgtgtcaatcaa
tttatcatcagcagaactcaagctcttatgttgcacatagattcttttattgagaatctt
tttgcactggctggcgatgaggagcctgaagtacgcaaaaatgtttgccgtgctctggta
atgttgctggaagttcggatggatcgccttcttcctcatatgattagtatagttgagtac
atgcttcaaaggacccaggaccaagatgaaaatgtggctttggaggcatgtgaattttgg
ctgactttggctgaacagccaatttgtaaagaggtattatgtcggcatcttactaagctg
atacctgtgctggtaaacggtatgaaatattcagagattgatattattctgttgaagggg
gatgttgaagaagatgaagctataccagatagtgagcaggatataaggcctcgttttcat
cgttcgaagacagtagctcagcaacatgaagaagatggtattgaagatgatgacgatgat
gatgatgaacttgatgatgatgatactatttctgactggaatttaaggaaatgttcagct
gctgctctagatgtcctagctaatgtatttcgtgatgaacttctgccacacatcttgcca
ctgttgaaggaattgctcttccaccccgagtgggtagttaaagaatctggtatccttgtt
cttggtgcaattgctgaaggctgcatgcagggtatgattccatatcttccagagctaatc
cctcaccttattcagtgcctctctgacaaaaaggctcttgtgcgctccattacatgctgg
actcttagtcgctatgcacactgggtagttagtcaacccccagacacatacttgaagcca
ttaatgactgagttgctaaagcgtatcttggatagcaacaagagagtacaagaagctgcc
tgcagtgcctttgctactctagaagaggaggcttgtacagagcttgttccttatcttgca
tatatacttgacactttggtcttcgcatttagtaaataccagcataaaaacctgctcatt
ctttatgatgctataggaaccctagcagattctgtaggacatcatctaaataaaccagaa
tatattcagatgctaatgcctccattaatccagaagtggaacatgctgaaggatgaagat
aaagatcttttccctttattagagtgcctgtcgtcagttgctactgccttgcaatctggc
tttcttccatactgtgaacctgtgtaccagcgttgtgtaaatctggtgcagaagacactt
gcacaagccatgttgcataatgctcagccagaccaatatgaggctccagataaagatttt
atgattgtggctcttgatttactcagtggtttagctgaaggacttggaggcaacattgaa
cagctagtggctcgcagcaatatcctgacactaatgtatcaatgcatgcaggacaaaatg
cctgaggtacggcagagttcttttgcattgttaggtgacctgacaaaggcatgttttcag
catgtcaaaccgtgcatcgctgatttcatgccaattttgggaaccaacctaaatcctgaa
ttcatttctgtgtgtaacaatgccacctgggcaattggagaaatctctatccagatgggt
atagaaatgcagccttatattccaatggtcttgcaccagcttgtagaaataataaacaga
cccaacacaccaaagacgttgttagagaacacagcaataacaattggtcgtcttggttac
gtttgtcctcaagaggtggcccccatgctacagcagtttataagaccctggtgtacctct
ttgcgaaacataagagacaatgaggaaaaggattcagcattccgtgggatatgtaccatg
attacggtcaaccccagtggagtagtccaagactttatttttttttgtgatgctgttgca
tcgtggattagcccaaaagatgatcttcgagacatgttctgtaagattcttcatggattt
aaaaatcaagttggggatgagaattggaggcgtttctctgaccagtttcctcttccctta
aaagagcgccttgcagcttactatggagtttaa

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (5)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (2)   
   RefSeq(pep) (2)   
DNA sequence (3)   
   RefSeq(nuc) (3)   
Protein domain (15)   
   Pfam (15)   
All databases (30)   

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