KEGG   Pseudomonas mandelii: OU5_2434
Entry
OU5_2434          CDS       T03626                                 
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
pman  Pseudomonas mandelii
Pathway
pman03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pman00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    OU5_2434
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pman03019]
    OU5_2434
Enzymes [BR:pman01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     OU5_2434
Messenger RNA biogenesis [BR:pman03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     OU5_2434
SSDB
Motif
Pfam: DEAD Helicase_C ResIII UTP25
Other DBs
NCBI-ProteinID: AHZ69513
UniProt: A0A024EAY1
Position
2723120..2724451
AA seq 443 aa
MTTPAAPPVEIVAAEPPRSESPKPAKPRREPKPKAPVIPWKLEDFAVEPQEGKTRFHDFK
LAPELMHAIQDLGFPYCTPIQAQVLGFTLAGKDAIGRAQTGTGKTAAFLISIITQLLETP
PPKERYMGEPRALIIAPTRELVVQIAKDAADLTKYTGLNVMTFVGGMDFDKQLKHLEARH
CDILVATPGRLLDFNQRGDVHLDMVEVMVLDEADRMLDMGFIPQVRQIIRQTPPKNERQT
LLFSATFTEDVMNLAKQWTTDPSIVEIESQNVASENVEQHIYAVAGADKYKLLYNLVNDN
GWERVMVFANRKDEVRRIEERLVRDGVNAAQLSGDVPQHKRIKTLEGFREGKIRVLVATD
VAGRGIHIDGISHVINFTLPEVPDDYVHRIGRTGRAGAEGVSISFAGEDDSYQLPSIEAL
LGRKISCETPPTHLLRAVERKRP
NT seq 1332 nt   +upstreamnt  +downstreamnt
gtgaccacaccggccgccccccctgtcgagattgtcgccgccgagccaccgcgcagcgaa
tcgccgaaaccggcaaaaccgcgtcgcgaaccgaaaccgaaagcgccggtcattccctgg
aaactcgaagacttcgccgttgaaccccaggaaggcaaaacccgtttccacgatttcaaa
ctcgccccggaattgatgcacgccatccaggacctgggcttcccgtactgcacgccgatc
caggcgcaagtgctgggcttcaccctcgcgggcaaagacgccatcggtcgcgcccagacc
ggcaccggcaaaaccgccgcgttcctgatttcgatcatcacgcaactgctggaaaccccg
ccacccaaggaacgctacatgggtgaaccgcgggcgctgatcatcgcgccaacccgcgag
ctggtggtgcagatcgccaaggacgccgccgacctgaccaagtacaccggcctcaacgtc
atgacgtttgtcggcggcatggacttcgacaagcagctcaagcacctcgaagcccgtcac
tgcgacatcctcgtggccaccccgggccgcctgctcgacttcaaccagcgcggtgacgtg
catctggacatggtcgaagtcatggtgctggacgaagccgaccgcatgctcgacatgggt
ttcatcccgcaagtgcgccagatcattcgccagacgccgccgaagaacgaacgtcagacg
ctgctgttctccgcaaccttcaccgaagacgtgatgaatctcgccaagcaatggaccacc
gacccgtcgatcgtcgagatcgaatcgcagaacgtggccagcgaaaacgtcgagcaacac
atctacgccgtcgccggtgccgacaaatacaaactgctctacaacctggtcaacgacaac
ggctgggagcgggtgatggtgtttgccaaccgcaaggatgaagtgcggcgcattgaagag
cgcctggtgcgtgacggcgtcaacgccgcgcaactgtccggcgacgtgccgcagcacaag
cgcatcaagaccctggaaggtttccgcgaaggcaagatccgcgtgctggtcgccactgat
gtggccggtcgcggcatccacatcgacggcatcagccacgtgatcaacttcaccctgccg
gaagtcccggacgactacgtgcaccgcatcggccgtaccggtcgtgctggcgcggagggc
gtgtccatcagcttcgccggtgaagatgactcctaccagctaccgtccatcgaggcattg
ctgggtcggaaaatcagctgtgaaacaccgccgacgcatctactgcgggcggttgagcgc
aagcgcccgtaa

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