KEGG   Planococcus sp. Y42: B0X71_11475
Entry
B0X71_11475       CDS       T04763                                 
Name
(GenBank) DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
pmar  Planococcus sp. Y42
Brite
KEGG Orthology (KO) [BR:pmar00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmar03032]
    B0X71_11475
   03036 Chromosome and associated proteins [BR:pmar03036]
    B0X71_11475
   03400 DNA repair and recombination proteins [BR:pmar03400]
    B0X71_11475
DNA replication proteins [BR:pmar03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    B0X71_11475
Chromosome and associated proteins [BR:pmar03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    B0X71_11475
DNA repair and recombination proteins [BR:pmar03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      B0X71_11475
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 DUF2267 HU-CCDC81_euk_2 Transposase_21
Other DBs
NCBI-ProteinID: AQQ53633
UniProt: A0A1Q2KZP3
Position
complement(2218323..2218595)
AA seq 90 aa
MNKTELVNSVAEAAGISRKDAASAVDATFDTIQNALTEGDKVSLIGFGNFEVRERAARKG
RNPQTGEEIEIAASKIPAFKPGKALKDAVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaaaacagaattggtgaactctgttgcagaagcggcaggcatctcccgtaaagat
gcagcaagtgcagtcgatgcaacattcgatacaatccagaatgcactgacagagggtgat
aaagtttccctgattggtttcgggaactttgaagtccgtgaacgggcagcccgtaaagga
cgcaacccgcaaacaggtgaggaaatcgaaatcgcagccagcaaaattcctgcattcaaa
ccaggaaaagcgctgaaagacgcggtaaaataa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (15)   

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