KEGG   Prochlorococcus marinus MIT 9301: P9301_01481
Entry
P9301_01481       CDS       T00488                                 
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
pmg  Prochlorococcus marinus MIT 9301
Pathway
pmg03030  DNA replication
pmg03430  Mismatch repair
pmg03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    P9301_01481 (holB)
   03430 Mismatch repair
    P9301_01481 (holB)
   03440 Homologous recombination
    P9301_01481 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmg03032]
    P9301_01481 (holB)
   03400 DNA repair and recombination proteins [BR:pmg03400]
    P9301_01481 (holB)
Enzymes [BR:pmg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     P9301_01481 (holB)
DNA replication proteins [BR:pmg03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     P9301_01481 (holB)
DNA repair and recombination proteins [BR:pmg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     P9301_01481 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2
Other DBs
NCBI-ProteinID: ABO16771
UniProt: A3PAJ6
Position
complement(136889..137851)
AA seq 320 aa
MIEVKKNNFFLNEEVNTILKNIIKNKSFTNGYIFYGAEGLGKKQTALQFIQEIFKESSPS
ENIEERITNNNHPDFLIIEPDSLLATKSSGSFDPEKTLKSGYEIIKIAQIRNIKTFLSQK
SINSEKKIVLIIDAHLLNEAASNCLLKTLEEPSNGIFILLTSKLNLLLDTIISRCQIVRF
RSFSNKQIKSILKEYLDTSKLKINAKLKFEDLINSANGSPNQLLKNIEIWNDFSDEIISK
LDSPVKSSLEILEISKSISEKFEISQQICLVNLIQTIWWRKTKNIRLVKKLENLKYLLRK
NIQPRLAWEITLLKISIDDI
NT seq 963 nt   +upstreamnt  +downstreamnt
atgattgaggttaaaaaaaataattttttcttaaatgaagaagtcaatactattcttaag
aacataattaaaaacaaatcatttactaatggctatatattttatggtgctgaaggatta
ggcaaaaagcaaactgcccttcaatttatacaagagattttcaaagagtcttcaccaagc
gaaaatattgaagagcgaattacaaacaataaccatcctgattttttaattattgaacct
gattctcttttggcaaccaaaagttcaggtagtttcgatcctgaaaaaacattaaaaagt
ggatatgagattattaaaattgctcaaatacgtaatatcaaaacttttcttagtcaaaaa
tcaataaactcagaaaaaaaaattgttttgattattgatgcacacctcttaaacgaagca
gcctcaaattgtcttttaaaaactttagaagaacctagtaacggcatttttattttacta
acgtctaaattaaaccttctcttagatacgatcatctcaagatgtcaaatcgtcagattt
cgatctttttctaataaacaaataaaatcaattttaaaagaatatttagacacttctaag
ttaaagatcaatgcaaaattaaaattcgaagatttgataaactctgcaaatggatctcca
aatcaattattgaaaaatattgaaatttggaacgatttttcagatgaaattataagtaaa
ttagattctccagttaaaagtagtctggaaatattagaaatatctaaatcaatatctgaa
aaattcgaaatttctcaacaaatttgtttagtaaatttaatacaaacaatttggtggaga
aaaacaaaaaacatcaggttagttaaaaaacttgaaaatttaaaatacctattaagaaaa
aacattcaaccaaggttggcttgggaaataactttattaaaaatttcaatagatgatata
tga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (1)   
   Pfam (1)   
All databases (14)   

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