KEGG   Prochlorococcus marinus MIT 9301: P9301_13921
Entry
P9301_13921       CDS       T00488                                 
Name
(GenBank) polyribonucleotide nucleotidyltransferase
  KO
K00962  polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]
Organism
pmg  Prochlorococcus marinus MIT 9301
Pathway
pmg03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pmg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    P9301_13921
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pmg03019]
    P9301_13921
   03016 Transfer RNA biogenesis [BR:pmg03016]
    P9301_13921
Enzymes [BR:pmg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.8  polyribonucleotide nucleotidyltransferase
     P9301_13921
Messenger RNA biogenesis [BR:pmg03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Other RNA degradosome components
     P9301_13921
Transfer RNA biogenesis [BR:pmg03016]
 Prokaryotic type
  tRNA degradation factors
   P9301_13921
SSDB
Motif
Pfam: RNase_PH RNase_PH_C S1 KH_1 PNPase PCB_OB KhpA-B_KH
Other DBs
NCBI-ProteinID: ABO18015
UniProt: A3PE40
Position
1159240..1161405
AA seq 721 aa
MEGQNKSITFDGREIRLTTGLYAPQANGSVMIECGDTSLLVTATKTTKKEVSDFLPLICD
YEEKLYAAGRIPGGFMRREGRPPERATLISRLIDRPMRPLFPSWMRDEIQIVASCLSLDE
RVPADILAVTGASIATLLGEIPFYGPMAAVRVGLIGDDFILNPSYREIEKGDLDIVVAGS
KEGIVMIEAGANQLSEQDTIEAIDFGYEAVSELIKSQEDLLKDLGIKQVKPSEPEEDKTL
PSFLEKNCTKPIELVLKKFDLSKEERDLELEKIKVETQGKIESLKDDNQLKVLLSENDKL
LSSDFKKLTKKLMRSQIINDGKRVDGRDLDEVRKISASAGILPKRVHGSALFQRGLTQVL
STTTLGTPSDAQEMDDLNPSTEKTYLHHYNFPPYSVGETRPMRTPGRREIGHGALAERAI
IPVLPGKETFPYVLRVVSEVLSSNGSTSMGSVCGSTLSLLDAGVPLKAPVSGTAMGLIKE
GKEVRILTDIQGIEDFLGDMDFKVAGTDKGITALQMDMKITGLPVSIISDAIKKARPARL
HILEKMQEAIEKPQETLSPHAPRLLSFRIDPELIGTVIGPGGRTIKGITERTNTKIDIED
GGIVTIASHDGAAAEEAQKIIEGLTRKVHEGEIFPGVVTRIIPIGAFVEILPGKEGMVHI
SQLSEARVERVEDVVRQGDEVTVRVREIDSRGRINLTLRGVGQNGGMSYPEPTPTPVAPL
S
NT seq 2166 nt   +upstreamnt  +downstreamnt
gtggaaggacaaaataagtcgatcacgtttgacggacgagagatacgactaacaacagga
ctatatgctcctcaagcaaatggatcagtaatgattgaatgtggagacacatctttatta
gttacagcaacaaaaactacaaaaaaagaagtttcagactttctccctctaatatgcgat
tatgaggaaaaattatatgctgcggggagaattccaggcggtttcatgagaagagagggc
cgccctccagaaagagcaactttaatttcaagattgattgataggcctatgagaccactt
ttcccctcttggatgagagacgagatacagatagtggcttcctgcctttctcttgatgag
agagtacctgcagacattctcgctgttacaggtgcttcaatagcaaccttgctcggagag
ataccattttacgggccaatggctgcagtaagagttgggctaataggagacgactttata
ctaaatccaagctatagagagatagaaaaaggagatttagatattgttgttgcaggctca
aaagaaggaattgtgatgattgaggcaggtgctaaccaattatcagaacaagatactata
gaggcaatagattttggatatgaggctgtatcagaacttattaaatctcaagaagattta
ctaaaagatttaggaataaagcaggttaagccatccgaacctgaagaagataaaacattg
ccttcttttttagagaaaaattgtacaaaacctattgagttagttttaaagaaatttgat
ctttcaaaagaggagagagatcttgaactcgaaaaaataaaagttgagactcaaggtaaa
attgaatccttgaaagatgataatcaactaaaagttcttctttcggagaatgataagtta
ttaagttccgactttaaaaaacttacaaagaaattaatgaggtcgcaaattattaatgat
ggtaagagagttgatggaagagatctagatgaagttagaaaaatttcagcttctgcaggt
attcttccaaaaagagttcatggttctgcattatttcaaagaggtttgactcaagtttta
tcaacaaccacattagggactcctagtgatgctcaagaaatggacgacctgaatccaagc
actgaaaaaacttatctacatcactataactttcctccttattcagtaggagaaacaaga
ccaatgaggacacctggcagaagagaaataggtcatggagcattagctgagagggcaata
attcctgtattgcctggcaaagagacatttccatacgtgcttagggtagtaagtgaggtc
ttaagctctaatggatcaacctcaatgggatcagtatgcggcagcacattatcactatta
gatgctggagtaccactaaaggcgccagttagcggaactgcaatgggtttaattaaagaa
ggaaaggaagttagaattcttaccgatatccagggaattgaagattttctaggagacatg
gactttaaagttgcaggtactgataaaggaataactgctttacaaatggatatgaaaatt
acaggtttaccagtttctattatttctgatgcaattaaaaaagctcggcctgcaagatta
catattttagaaaagatgcaagaagctattgaaaaaccacaagaaacgttatctcctcat
gcaccaaggctgttaagttttagaattgacccagaacttattggaactgtaattggccct
ggtggaagaactattaaagggataacagaaagaacaaacacaaaaatagatattgaagat
ggaggaattgttactattgcgtcgcatgatggagctgccgcagaggaagcacagaagatt
atagagggattaactagaaaggttcatgaaggagaaattttccctggggtcgtaacccga
attattccaataggagcatttgtagaaatactacccggcaaggaaggtatggttcatata
tcccaattatctgaagccagagttgagagggttgaagatgttgttaggcaaggagatgaa
gtaactgttagagttagagaaattgatagcagaggtaggataaatcttactttaagagga
gttggtcaaaatggtggcatgtcttatcccgaacccacacctactccagtagcccccctt
agttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   SWISS-PROT (1)   
Protein domain (7)   
   Pfam (7)   
All databases (19)   

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