KEGG   Parvimonas micra: NW74_06450
Entry
NW74_06450        CDS       T03515                                 
Name
(GenBank) DNA-directed RNA polymerase subunit alpha/beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
pmic  Parvimonas micra
Pathway
pmic03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pmic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    NW74_06450
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmic03021]
    NW74_06450
   03400 DNA repair and recombination proteins [BR:pmic03400]
    NW74_06450
Enzymes [BR:pmic01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     NW74_06450
Transcription machinery [BR:pmic03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     NW74_06450
DNA repair and recombination proteins [BR:pmic03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      NW74_06450
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_4 Apocytochr_F_C RPOC_hybrid Peptidase_M23 NusG_add
Other DBs
NCBI-ProteinID: AIZ36992
UniProt: A0A0B4S2E9
Position
complement(1372179..1375802)
AA seq 1207 aa
MLELNNFDAMKIGLASPDKIRSWSRGEVKKPETINYRTLKPEKDGLFCEKIFGPVKDWEC
NCGKYKRIKYKGNVCEKCGVEITKSKVRRERMGHIELVAPVSHIWYFKGIPSRMGLILDM
SPRALEKILYFANYVVLDAKDTDLYVKQLLTEGEYGEACEKFGAENFRVGMGAEAIKELL
ENIDLDELSDELKKGLVDATGQKKIRLSRRLEVCEAFRKSGNRPEWMIIDVVPVIPPDLR
PMVQLEGGRFATSDLNDLYRRVINRNNRLKKLIEIHAPEIIMRNEKRMLQEAVDTLIDNG
RHGKAVTGAGNRELKSLSDMLKGKTGRFRQNLLGKRVDYSGRSVIVVGPDLKFHQCGLPK
KMALELFKPFIMKQLVEDGIVHNIKSAKKYVERLNSNVWDILDKVIKDHPVLLNRAPTLH
RLGIQAFEPVLVEGKAIKLHPLVCTAYNADFDGDQMAVHLPLSTEAQAEARLLMLSTNNI
LAPKDGKPITTPTQDMVLGSYYLTSGTVEEQAVRSFMDYDEMFKAYSTNNVKIHDTVNIL
YRDEETGESQIVKSTVGRFIFNEHIPQDLGFVDRSKDKFSLEIDRLVDKKMLGKIVDKCF
RKHGNIKTAEVLDYIKSTGYKYSTVGAISISMNDVIVPEEKWEILKEAEKKIAVYEELFR
DGLVSEQERYEYVISVWTKATEDITKILVEKQDPTNSISIMADSGARGNINQIRQLAGMR
GLMSSATGRIVEIPIKANFREGLSVQEFFISTHGSRKGLSDTALRTADSGYLTRRLVDVS
QDVIVREDDCCTDEYVLARDFKDGNAIVEKLADRIVGRHSFEDVLNPTTGEILIHKNEMI
TESLAEKVEKLGITEIKVRSVLGCKSKHGVCAKCYGRNLATGNPVNIGEAVGIIAAQSIG
EPGTQLTMRTFHSGGVAGVGITQGLPRVEELFEARKPKGLAYITEIDGTVKLVDNKKRYD
IVVTADDGDERIYAIPYGARIKVKDGEKIKAGDMLTEGSINPHDILAIKGPTGVQEYITK
EVQKVYRNQGVDIDDRHIEIIIKQMLSKVKIDTSGDTNFLEGSLVPFREVEAVNRQMLDE
DKIPATFDNVLLGITKASLATESFLSAASFQETTRVLTDASIKGKVDGLIGLKENVILGK
LIPAGTGMKVYKSIEIDYETMEEEERLAREETVEHNESEETKEYDESNEVEEKESETETE
EVEKVEE
NT seq 3624 nt   +upstreamnt  +downstreamnt
ttgttggaattaaataattttgatgcaatgaaaattggcttagcttcacctgataagata
agaagttggtcaagaggagaagttaaaaaaccagaaaccataaattacagaaccttaaag
cctgaaaaagatggtcttttctgtgaaaaaatatttgggccggtaaaggactgggaatgt
aattgtggtaagtataaaagaataaaatacaagggaaatgtatgtgaaaaatgtggagtt
gaaatcacaaagtctaaagtgagacgtgagagaatgggtcatatagaacttgttgctccg
gtttctcatatatggtattttaaaggaataccttcaagaatgggtcttatattagatatg
agcccaagagctcttgaaaaaatcttatattttgcaaattatgttgttcttgatgcaaaa
gatactgacctttatgttaaacaattactaactgaaggcgaatatggagaagcttgtgaa
aaatttggtgcagaaaatttcagagttggaatgggtgctgaagcaattaaagagctttta
gaaaatatagatttagatgagctttcagatgaattgaaaaaaggtcttgttgatgcaact
ggtcaaaagaaaattagactttcgagaagacttgaagtttgtgaagctttcagaaaatca
ggaaatagacctgaatggatgattattgatgtcgttcctgttattccacctgatttaaga
cctatggttcaacttgaaggtggaagatttgcaacttcagacttaaatgatttgtataga
cgtgttataaatagaaataacagattgaaaaaacttattgaaattcacgctccggaaatc
attatgagaaatgaaaagagaatgttacaagaagctgtggatacattaatagataatggt
agacatggaaaagctgtaacaggagcaggaaatagagagcttaaatctttatcagatatg
ttaaagggaaagacaggaagatttagacaaaacttacttggaaagcgtgttgactattca
ggacgttcagtaatcgtagtaggaccagatttaaaattccaccaatgtggacttcctaaa
aaaatggctcttgaattattcaaacccttcattatgaaacaattagttgaagacggaatt
gttcataatattaagagtgcaaaaaaatatgtagaaagattaaattcaaatgtttgggac
atcttggataaagttatcaaagatcatcctgtgcttttaaacagagcaccgactcttcat
agacttggtattcaagcatttgaaccggttttagttgaaggaaaagcaataaaattacat
ccgttagtttgtactgcatataatgccgactttgacggtgaccaaatggctgtgcattta
cctttatcaactgaagcccaagcagaagcaagacttttgatgctttctacaaataatatt
ttagcaccaaaagatggtaagcctatcacaactcctacacaagatatggtattaggttca
tattacttaacaagtggaactgttgaagaacaagctgttcgttcatttatggattatgat
gaaatgtttaaggcttattctacaaataatgttaaaattcatgatactgttaatatcttg
tatagagatgaagaaacaggagaaagtcaaattgtaaaatcaactgttggtagatttata
tttaatgaacatattccacaagatttaggatttgttgatagaagtaaagataaattttca
ttagaaatagatagacttgtagataaaaaaatgcttggtaagattgtagataaatgtttt
agaaaacatggaaatattaaaactgctgaagtattagactatattaaatctacaggatat
aaatattcaactgttggagctatttcaatttcaatgaatgacgtaatagttccagaagaa
aaatgggaaattcttaaagaagcagaaaagaaaattgctgtttatgaagaattatttaga
gacggtttagtttccgaacaagaaagatatgaatatgtaatctctgtttggactaaagct
actgaagatattacaaagattcttgttgaaaagcaagatcctacaaatagtatttcaatc
atggctgactcaggagccagaggtaatattaaccaaattagacagttagcgggaatgcgt
ggacttatgagttctgctactggtagaatcgtagaaattcctatcaaagcaaactttaga
gaaggtctttctgtacaagagttctttatttcaactcatggttcaagaaaaggactttca
gatactgcacttagaacagctgactctggatatttaacaagaagacttgtagatgtttct
caagatgttattgttagagaagatgactgttgtacagatgaatatgtattggctagagac
tttaaagatggaaatgccatagttgaaaaacttgcggatagaattgtaggtagacattca
tttgaagatgtattaaatcctactacaggagagatattaattcataagaatgaaatgatt
accgaaagtctagctgaaaaagttgaaaaacttggaattacagaaataaaagtacgttct
gttctaggctgtaaatctaaacatggtgtttgtgcaaaatgttatggacgtaatcttgca
acaggaaatccagttaacattggagaagctgtaggaattatagctgctcaatctatcggg
gaacctggtactcagcttacaatgagaacattccactccggtggagttgccggtgttgga
atcactcaaggtcttcctcgtgttgaagaactttttgaagcaagaaaaccaaaaggactt
gcttatataactgaaatagacggtactgtaaaattagttgataataagaagagatatgat
atagttgtaactgccgatgatggtgatgaaagaatttatgctataccttatggagccaga
attaaagttaaagatggagaaaaaattaaagcgggcgatatgcttactgaaggttctata
aatccacatgacattttagctattaaaggtccaacaggtgttcaagaatacatcactaaa
gaagttcaaaaagtttatcgtaatcaaggagtagatatcgatgatagacatatcgaaatc
attataaaacaaatgctttctaaagttaaaattgatacttcgggagatactaatttccta
gagggaagtctggttccgtttagagaagtagaagctgttaatagacaaatgttagatgaa
gataagattcctgcaacttttgataatgtattattgggaatcacaaaggcgtctcttgct
actgaaagtttcttatcagcggcatcattccaagaaacaaccagagttttaactgatgct
tctataaaaggaaaagtggacgggttgatcggattgaaagaaaatgtaattttaggtaaa
cttattcctgccggaacaggtatgaaagtctataaatccattgaaattgattatgaaaca
atggaggaagaagaaagacttgcaagagaagaaactgttgaacataatgaatctgaagaa
actaaagaatatgatgaatcaaatgaagtagaagaaaaagaaagtgaaactgaaactgaa
gaagttgaaaaagtagaggaatag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (37)   

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