KEGG   Prochlorococcus marinus MIT 9211: P9211_01431
Entry
P9211_01431       CDS       T00616                                 
Symbol
holB
Name
(GenBank) DNA polymerase III, delta prime subunit
  KO
K02341  DNA polymerase III subunit delta' [EC:2.7.7.7]
Organism
pmj  Prochlorococcus marinus MIT 9211
Pathway
pmj03030  DNA replication
pmj03430  Mismatch repair
pmj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    P9211_01431 (holB)
   03430 Mismatch repair
    P9211_01431 (holB)
   03440 Homologous recombination
    P9211_01431 (holB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmj03032]
    P9211_01431 (holB)
   03400 DNA repair and recombination proteins [BR:pmj03400]
    P9211_01431 (holB)
Enzymes [BR:pmj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     P9211_01431 (holB)
DNA replication proteins [BR:pmj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     P9211_01431 (holB)
DNA repair and recombination proteins [BR:pmj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     P9211_01431 (holB)
SSDB
Motif
Pfam: DNA_pol3_delta2 AAA
Other DBs
NCBI-ProteinID: ABX08074
CyanoBase: P9211_01431
UniProt: A9BCY6
Position
complement(138930..139907)
AA seq 325 aa
MKNNLFAGIEDQNLAINILTEVIHKNKIAPGYLFSGPQGVGQRIVTLRFLEGLITGGDVE
PTIRKRLESLNHPDLLWVEPSYISQGRVIKQSLAQKDNININAISKIRLDQIKELKTFLG
KRTIEAKLAMVVIEDAEKMNEAASNALLKTLEEVNNGLIILISSRSENLLSTIKSRCHEI
PFKPLKYHSLEELFINYGEDNKINNYTFDSRKELINLSNGSPELLIRNINKIQEIPSEIL
LSLTKLPNDYLEAITIAKDIIENLDIEQQLWIINFLQQHFWLRESNLYCMNVLKVLSSHL
VSSIQPRIAWEVALIELTSQNYKDC
NT seq 978 nt   +upstreamnt  +downstreamnt
atgaaaaataatttatttgcaggtattgaagatcaaaatttagcaattaatattttaaca
gaagtaatacataagaataaaatagcgcctggttatctcttctcaggtcctcaaggagta
ggccaaagaattgttacacttcgatttcttgaaggacttattactggtggggatgtcgaa
ccaacaataagaaaacgtttagaaagtttgaatcatccagaccttctttgggtggagcct
tcatatatttctcaaggccgagtaataaaacaatctcttgcccagaaagacaatataaat
ataaatgctatttcaaaaataaggctcgatcagattaaggaattaaaaactttcttagga
aaaagaactatagaggcaaaattagcaatggtagtcattgaagatgcagaaaagatgaat
gaagcagcttccaatgctcttctaaaaacgctcgaagaagtcaataatggtttaataatc
cttatctctagcagatctgaaaatcttttaagcacaataaaatctagatgtcatgaaata
ccattcaaaccattaaaatatcattcgcttgaagaattatttataaactatggagaagat
aataagattaataattatacctttgacagccgtaaagagttaattaatctttctaatgga
tcacctgaattattaattagaaatattaataaaatacaagaaatacctagtgaaatttta
ttaagtctcacaaaactaccgaatgactatttggaagcaatcactattgcaaaagatatt
attgaaaatttagacattgagcagcaactatggataattaattttctacagcaacatttt
tggttgcgagaatctaatctatattgtatgaatgttttaaaagtgcttagtagccatttg
gttagttcaattcaaccaagaattgcttgggaagttgcactaatagaactaacttcacag
aattacaaagattgttaa

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (16)   

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