KEGG   Prochlorococcus marinus MIT 9211: P9211_04331
Entry
P9211_04331       CDS       T00616                                 
Symbol
topA
Name
(GenBank) Prokaryotic DNA topoisomerase
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
pmj  Prochlorococcus marinus MIT 9211
Brite
KEGG Orthology (KO) [BR:pmj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmj03032]
    P9211_04331 (topA)
   03400 DNA repair and recombination proteins [BR:pmj03400]
    P9211_04331 (topA)
Enzymes [BR:pmj01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     P9211_04331 (topA)
DNA replication proteins [BR:pmj03032]
 Prokaryotic type
  DNA Topoisomerases
   P9211_04331 (topA)
DNA repair and recombination proteins [BR:pmj03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      P9211_04331 (topA)
SSDB
Motif
Pfam: Topoisom_bac Toprim_C_rpt Toprim HTH_Tnp_Tc3_1 Toprim_4
Other DBs
NCBI-ProteinID: ABX08364
CyanoBase: P9211_04331
UniProt: A9BE54
Position
408102..410801
AA seq 899 aa
MAQALVIVESPTKARTIKSFLPKDFEVVASMGHVRDLPNSASEIPAAQKGEKWATLGVNT
TADFEPLYVVPKDKKKIVRELKTALKGADQLLLATDEDREGESISWHLLQLLNPKVPAKR
MVFHEITKDAISHALTQTRDLDMELVHAQETRRILDRLVGYTLSPLLWKKVAWGLSAGRV
QSVAVRLLVLRERARRAFRSANYWDLKTTLQNQGNSFEAKLATLGGQKIASGIDFDDSTG
LMKDGNNARLVSEKEAKDLAKTLQLNEWKVSSIEEKPTVRRPVPPFTTSTLQQESNRKLR
LSTRETMRCAQGLYERGFITYMRTDSVHLSEQAIKASRKCIESRYGADYLSNKVRQFSNK
SRNAQEAHEAIRPAGATFKMPDQTGLEGRDLALYELIWKRTVASQMQEARLTMIGVEITV
GDAVFRSSGKRIDFPGFFRAYVEGNDDPDAALEGQEVLLPSLEVGDTPIVEKIEPLAHQT
QPPARYSEASLVKMLEKEGIGRPSTYSSIIGTIVDRGYSSIHNNSLIPSFTAFAVTALLE
EHFPDLVDTRFTARMELTLDEISTGKVEWLPYLSGFYKGEDGLENQVEKKEGDIDPGLSR
TIALEGLKCVVRIGRFGAYLESRRLGDNGEEELIKATLPQETTPADLDEEKAELILKQKS
DQPDPLGTDPETGEEIYLLFGQYGPYVQRGQVTDEVPKPKRASVPKAVKPEDLTIEEALG
LLKLPRALGEHPDGGKIAAGLGRFGPYIVWNKGKGEKDYRSLKGADDVLEVKIERALELL
AMPKRGRGGRTALKDLGIPKGQKDKVEVYNGPYGLYVKQGKVNASLPKGKSAEEITIEEA
VELLEAKLTSKKTKKKKVAKPKSSTKSKAKSNKATPKAPSTTKSGRLRASAVRVIKSGN
NT seq 2700 nt   +upstreamnt  +downstreamnt
gtggcgcaagctctagtaatcgttgaaagtccaacaaaggcacgaactataaaaagcttc
ttgccgaaagactttgaagtggtcgcttccatggggcatgtcagggatcttcccaatagt
gcaagtgagatccctgctgctcaaaaaggcgaaaaatgggcaactttaggggtgaatacg
acggcggactttgaacctttgtatgttgtaccaaaagataaaaaaaagattgttagggag
cttaaaactgctttaaaaggcgctgaccagcttttgcttgcaactgatgaagatcgagaa
ggcgaaagcattagctggcacttattgcagcttctgaacccaaaggttcctgccaagaga
atggtttttcatgagattacaaaggacgcaatatctcatgctctgactcagacaagagat
cttgatatggaattggtccatgctcaagagaccaggcgtattcttgaccgattagtggga
tacaccctttcacctcttctttggaaaaaggttgcatggggactttctgctggaagagtt
caatctgttgctgtccgactcctagttctccgtgaacgtgcccgtagagcttttagaagc
gcgaattattgggatttgaaaactactttacaaaatcaagggaactcatttgaggcaaaa
ctggcaactctgggcggccagaaaatagctagcgggattgattttgatgattccactggc
ttgatgaaggatggaaataatgctcgcttggtcagtgaaaaagaagcaaaagatcttgca
aaaacactccaattgaatgaatggaaagttagttcgattgaagaaaagcctacagttagg
agaccagtacccccatttactacaagtactcttcaacaggagtcaaaccgcaagcttagg
ctctcgactagagaaacgatgagatgtgcacagggtctatatgagagaggttttataact
tatatgcgaactgattcagttcatctctcagagcaggcaattaaagcttctagaaaatgt
attgagtctagatatggagctgattacttaagtaataaagtccgtcaatttagcaataag
tctagaaatgctcaagaagcacatgaagccattcggcctgcgggagcaacttttaagatg
ccagatcaaacagggcttgaaggtagagatctggcgctttatgaattgatatggaaaaga
acggttgcgagtcaaatgcaagaagctcgcttgacaatgattggagttgaaataacagtt
ggtgatgctgtgtttcgttcttctggtaagagaattgactttcctggtttcttccgagct
tatgtggaaggaaatgatgatccagatgcagccttagaaggtcaagaagtccttcttcca
agtttggaggtgggagatacacctattgtcgaaaagatagagccgttagctcatcaaaca
caaccacctgcccgctatagtgaagcttccttggtaaaaatgcttgagaaggaaggtatt
ggaagaccttctacgtattcaagtattattggaaccattgtggatagaggttattcctct
atccacaataattctttaatacctagctttacagcatttgcagtaacggctttattagaa
gaacatttcccagatctagttgatactaggtttactgctagaatggaattgactttagat
gaaatctctacaggtaaagtggagtggttaccatatttatcaggcttttataaaggagag
gatggccttgaaaatcaagtcgagaaaaaagaaggagacatagacccaggtttatctaga
actattgctttagaaggcctaaaatgtgttgtcaggattggacgctttggagcctatctt
gaatcgagacgtctaggagataatggcgaagaagagttgattaaagccacactccctcaa
gaaacgaccccagcagatctggatgaagagaaagcagagttaattctgaagcaaaaatca
gatcaacctgatcctttggggacggatcctgaaacaggtgaagagatttatttgctcttt
ggtcaatatggcccttatgttcagagagggcaagtaactgatgaggtgccgaaaccaaaa
agagcttcagtgccaaaagcagttaaaccagaagatctgactatagaggaagcccttggg
ttgcttaaattgccacgtgctcttggggagcatcctgatgggggtaagattgctgcaggt
cttgggcgctttggtccttatattgtttggaataaaggaaaaggagaaaaagattatcga
tcactaaaaggagctgatgatgttcttgaagtaaagattgaaagagcacttgagttattg
gctatgccaaagagaggtagaggtggtaggactgcattgaaagaccttggcatacctaag
ggacagaaagataaggttgaggtttataacggcccctatggactttacgtaaaacaaggg
aaagtcaatgcttctttgccaaaaggtaaaagtgctgaagaaattaccatcgaagaagca
gttgaattgctcgaagctaaacttacaagtaaaaaaactaaaaagaaaaaagtagctaaa
cccaaaagctctacaaaaagcaaagcaaagtccaataaagcgactcctaaagctccatct
actactaagtcaggacgattaagagcaagtgcggtaagagttattaagtctggtaattaa

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Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   CYANOBASE (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (16)   

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