KEGG   Pseudomonas mendocina NK-01: MDS_0471
Entry
MDS_0471          CDS       T01473                                 
Name
(GenBank) 16S ribosomal RNA methyltransferase RsmE
  KO
K09761  16S rRNA (uracil1498-N3)-methyltransferase [EC:2.1.1.193]
Organism
pmk  Pseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:pmk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pmk03009]
    MDS_0471
Enzymes [BR:pmk01000]
 2. Transferases
  2.1  Transferring one-carbon groups
   2.1.1  Methyltransferases
    2.1.1.193  16S rRNA (uracil1498-N3)-methyltransferase
     MDS_0471
Ribosome biogenesis [BR:pmk03009]
 Prokaryotic type
  rRNA modification factors
   16S rRNA modification factors
    MDS_0471
SSDB
Motif
Pfam: Methyltrans_RNA PUA_4 CYNS_N
Other DBs
NCBI-ProteinID: AEB56502
Position
complement(503977..504696)
AA seq 239 aa
MRLSRFFIDAPLSLGQHELPEAQAHYIGRVLRHAVGDAVQLFDGSGQEYLGELIEVGKKS
VRVELRESIAGLAESPLRIHLGQGLSRGERMDWAIQKATELGASEITPIVSTRCEVRLKD
ERADKRMAHWRQVAISACEQCGRSVLPLIHAPLELDAWLQQIEADLKLVLHPVAEPWVGH
APPRALAFLIGPEGGLSDAEVDQAKGAGFHAARLGPRVLRTETAPVVALSVAQQLWGDL
NT seq 720 nt   +upstreamnt  +downstreamnt
atgcgcctatcccgtttcttcatcgacgctccactttcccttggtcagcacgaactgccc
gaggcccaggcccactacatcggtcgtgtgctgcgccacgcggtgggcgatgccgtgcag
ctgttcgacggcagcggccaggagtacctcggcgagctgatcgaggtgggcaagaagagc
gtgcgcgtcgagctgcgcgaatctatcgccggcctggccgagtcgccgctgcgcattcat
ctgggtcagggcctgtcgcgcggcgagcgcatggactgggcgatccagaaggccaccgag
ctcggcgccagcgaaatcactccgatcgtctcgacacgctgcgaggtgcgcctgaaagac
gagcgcgccgacaagcgcatggcgcactggcgccaggtggcgatcagcgcctgcgagcag
tgcggtcgctcggtgctgccgctgatccatgcgccgctggaactggacgcctggctgcag
cagatcgaagccgacctgaagctggtgctgcacccggtcgccgagccctgggtcggccat
gccccgccacgcgccctggcttttttgatcggcccggaaggtggtctgagcgatgctgaa
gtcgatcaggctaagggggccggcttccacgccgcacgcctcggacctcgagttttgcgc
acggaaacggcgccagtagtggccctgagtgtcgctcagcagttgtggggcgacctgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (11)   

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