KEGG   Pseudomonas mendocina NK-01: MDS_1266
Entry
MDS_1266          CDS       T01473                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase A
  KO
K06177  tRNA pseudouridine32 synthase / 23S rRNA pseudouridine746 synthase [EC:5.4.99.28 5.4.99.29]
Organism
pmk  Pseudomonas mendocina NK-01
Brite
KEGG Orthology (KO) [BR:pmk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pmk03009]
    MDS_1266
   03016 Transfer RNA biogenesis [BR:pmk03016]
    MDS_1266
Enzymes [BR:pmk01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     MDS_1266
    5.4.99.29  23S rRNA pseudouridine746 synthase
     MDS_1266
Ribosome biogenesis [BR:pmk03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    MDS_1266
Transfer RNA biogenesis [BR:pmk03016]
 Prokaryotic type
  tRNA modification factors
   Psudouridine synthases
    MDS_1266
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AEB57297
Position
complement(1391530..1392165)
AA seq 211 aa
MPLSQIEILHQDTALLVINKPTLLLSVPGRADDNKDCLVTRLQENGYPEARIVHRLDWET
SGIIVLARDADSHRELSRQFHDRETEKAYTALCWGQPQADSGSIDLPLRYDPPTKPRHVV
DHELGKHALTHWRVIERCGDWCRVELTPITGRSHQLRVHMLSIGHPLLGDRLYAHEQALA
AFDRLCLHASMLALTHPQTGERMRFECPAPF
NT seq 636 nt   +upstreamnt  +downstreamnt
atgccgctaagccagatcgaaattctccaccaggacaccgccctgctggtgatcaacaag
cccaccctgctgctgtcggtgcccggccgtgccgatgacaacaaggattgcctggttacc
cgcctgcaggagaacggctaccccgaggcgcgcatcgttcatcggctggactgggaaacc
tccggcatcatcgtcctggcccgcgatgccgacagccaccgcgagctgtcccggcagttc
cacgatcgcgaaaccgagaaggcctacaccgccctgtgctggggccaaccacaggccgac
agtggcagcatcgacctgccgctgcgctacgacccgccgaccaaaccacgtcacgtcgtc
gatcacgaactgggcaagcatgccctgacccactggcgcgtcatcgagcgctgcggcgac
tggtgccgggtagagctcacgcccatcaccggccgctcgcaccagttgcgtgtgcatatg
ctgtccatcggtcacccgctgctgggtgatcgtctctacgcccatgaacaagccctggcc
gcctttgatcgcctgtgcctgcacgccagcatgcttgccctgactcacccgcaaacgggc
gagcgtatgcgcttcgagtgcccggcgccgttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (2)   
   KEGG ENZYME (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (1)   
   Pfam (1)   
All databases (11)   

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