KEGG   Pseudomonas mendocina NK-01: MDS_2065
Entry
MDS_2065          CDS       T01473                                 
Name
(GenBank) recombination protein RecR
  KO
K06187  recombination protein RecR
Organism
pmk  Pseudomonas mendocina NK-01
Pathway
pmk03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pmk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    MDS_2065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmk03400]
    MDS_2065
DNA repair and recombination proteins [BR:pmk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     MDS_2065
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     RecET pathway
      MDS_2065
SSDB
Motif
Pfam: Toprim_4 RecR_HhH RecR_C Toprim RecR_ZnF HHH_5 Toprim_2 HHH zn-ribbon_14
Other DBs
NCBI-ProteinID: AEB58096
Position
2281480..2282079
AA seq 199 aa
MSFSPLIRQLIDSLRILPGVGQKTAQRMALQLLERDRSGGQRLAQALNAAMEGVGHCKRC
RSLSEDEVCQLCLDERRDDSVLCVVEGPMDVHAVEQTGYRGRYFVLKGHLSPLDGLGPEA
IGIPELLERIEAGAFSEVILATNPTVEGEATAHYIAQILAGKGLVASRIAHGMPLGGELE
LVDGGTLAHALAGRRPISL
NT seq 600 nt   +upstreamnt  +downstreamnt
atgagcttcagccccctgattcgccaactgatcgactccttgcgcatcctgcccggtgtc
gggcagaagactgcgcagcgcatggccttgcagttgctcgagcgtgatcgcagcggtggt
cagcgtttggcgcaggcgctcaatgcggcgatggagggcgtgggtcactgcaagcgctgc
cgcagcctcagcgaagatgaagtttgtcagctatgcctcgacgagcgtcgtgacgacagt
gtgctctgtgtggtcgaggggccgatggacgtgcatgcggtggaacagaccggctatcgc
gggcgctatttcgtgctcaagggccacctgtcgccactcgatggtctgggtccggaagcc
atcggcattcccgaactgctggaacgcatcgaggctggcgccttcagtgaagtgatcttg
gccaccaacccgacagtagagggcgaggccacggcgcactacattgcgcagattctggcg
ggcaagggcctggtcgcctcgcgcattgctcacggcatgccgctaggtggcgaactggag
ctggtcgacggcggtaccctggctcacgccctggctggccgtcgtccgatcagtctgtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (9)   
   Pfam (9)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system