KEGG   Pseudomonas mendocina NK-01: MDS_2905
Entry
MDS_2905          CDS       T01473                                 
Name
(GenBank) conjugal transfer protein TrbJ
  KO
K20266  type IV secretion system protein TrbJ
Organism
pmk  Pseudomonas mendocina NK-01
Pathway
pmk02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:pmk00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MDS_2905
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pmk02044]
    MDS_2905
Secretion system [BR:pmk02044]
 Type IV secretion system
  Trb secretion system protein
   MDS_2905
SSDB
Motif
Pfam: Mod_r DUF4141 DUF6435 DUF724 DUF948
Other DBs
NCBI-ProteinID: AEB58936
Position
3209954..3210688
AA seq 244 aa
MRSPAHRFPGATLLVLGLLAVKPASAFTVIDPTNLVQNTLTAVRTLEMANNQVRQLQNET
QMLLNQARHLQRLDYNVVSQLRASLANTERLLAEARGLAYEVQRLDQEFSRLYPNEYTGD
VSSQRLAEEARERWQQGLDGLHTALRVQAQVTQNLAEDESALADLVQQSQSAGGALQAAQ
ATNQLLALQAKQSIQAQQLQITQNRAVALELARQSAAAEEARERRRRFMGNGTPYTPYPV
QFYR
NT seq 735 nt   +upstreamnt  +downstreamnt
atgagatcccctgcccaccgctttcccggcgcaacgctgctcgtactgggtctattggcc
gtgaagccggccagcgctttcaccgtaatcgatccgaccaacctggtgcagaacaccctg
actgcggtgcgcaccctggagatggcgaacaaccaagttcgccaattacagaacgagacc
cagatgctgctgaaccaggcccgtcacctgcagcgcctggactacaacgtggtcagccag
ttgcgcgcgagcttggccaatactgagcggctgctcgccgaggcgcgagggctggcctac
gaagtgcagcgcctggatcaggagttcagccgactctacccgaacgagtacaccggcgac
gtcagcagccaacgcctggcagaagaagcacgcgaacgctggcagcagggcctcgacggg
ctgcatacggcgctgcgtgtacaggcccaggtgacgcagaacctggccgaggatgagagc
gccttggccgatctggtgcagcagagccagtcggcgggtggcgccttgcaggctgcccag
gccaccaaccaactgctggccctgcaggccaagcagtcgatccaagcgcagcagttgcag
atcacccagaaccgcgccgtcgccctggagcttgcccgtcagtctgcagcggccgaggag
gcacgcgaacggcggcgtcgctttatgggcaacggcacgccctataccccctaccccgtg
cagttctatcggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (5)   
   Pfam (5)   
All databases (12)   

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