KEGG   Pseudomonas mendocina NK-01: MDS_3344
Entry
MDS_3344          CDS       T01473                                 
Name
(GenBank) succinyl-diaminopimelate desuccinylase
  KO
K01439  succinyl-diaminopimelate desuccinylase [EC:3.5.1.18]
Organism
pmk  Pseudomonas mendocina NK-01
Pathway
pmk00300  Lysine biosynthesis
pmk01100  Metabolic pathways
pmk01120  Microbial metabolism in diverse environments
pmk01230  Biosynthesis of amino acids
Module
pmk_M00016  Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:pmk00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    MDS_3344
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pmk01002]
    MDS_3344
Enzymes [BR:pmk01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.18  succinyl-diaminopimelate desuccinylase
     MDS_3344
Peptidases and inhibitors [BR:pmk01002]
 Metallo peptidases
  Family M20
   MDS_3344
SSDB
Motif
Pfam: Peptidase_M20 M20_dimer Peptidase_M28
Other DBs
NCBI-ProteinID: AEB59375
Position
3698656..3699798
AA seq 380 aa
MTPTLTPTLELAFDLIRRPSVTPVDEGCQELMMRRLAACGFEVERMRIEEVENFWAKRGG
DGPVLCFAGHTDVVPTGPLDAWQYQPFDVRVDEEGMLCGRGAADMKGSLASMIIAVERFV
AEHPNHKGAISFLITSDEEGPAQHGTKAVVERLRERGERLDWCIVGEPSSTSLLGDVVKN
GRRGSLGCTLTVYGKQGHVAYPHLAKNPIHLAAPALAELAAEHWDHGNDYFPPTSFQVSN
LNSGTGATNVIPGELKAVFNFRFSTESTVEGLQQRVTAILDKHGLDYHLEWALSGLPFLT
QPGDLLDAVAASIKNVTGRDTTPSTSGGTSDGRFIATLGTQVVELGPVNATIHQINERVL
ASDLDLLTEVYYQTMVKLLA
NT seq 1143 nt   +upstreamnt  +downstreamnt
atgacccccaccctcaccccgaccctggaactcgccttcgacctgattcgtcgcccgtcc
gtgaccccggtcgacgaaggctgccaggagctgatgatgcgccgcctggctgcctgcggt
ttcgaggtggagcgcatgcgcatcgaagaggtggagaatttctgggccaaacgcggtggc
gacggcccggtgctgtgcttcgccggccacaccgatgtggtgcccaccggcccgctggac
gcctggcagtaccagccgttcgacgtgcgcgtggacgaagaaggcatgctctgcggccgt
ggcgcggcggacatgaaaggcagcctggcgagcatgatcatcgccgtcgagcgcttcgtc
gcagagcatccgaaccataagggcgcgatcagcttcctgatcaccagcgacgaggaaggc
ccggcgcagcatggcaccaaggccgtggtcgagcgcctgcgcgaacgcggcgagcgcctg
gactggtgcatcgtcggcgagccgtcgagcaccagcctgcttggtgacgtggtcaagaac
gggcgccgcggctcgctcggctgcaccctcaccgtctacggcaagcagggccatgtcgcc
tacccgcatctggcgaagaacccgattcatctcgctgccccggccctggccgaactggcc
gccgagcactgggatcacggcaacgattacttcccgccgaccagcttccaggtgtccaac
ctcaactcgggcaccggcgccaccaacgttatcccaggtgaactgaaggcggtgttcaac
ttccgcttctccaccgaatccaccgtcgaaggcctgcagcagcgcgtcaccgccattctc
gacaagcatggcctggactatcacctggagtgggcgctgtccggcctgcctttcctcacc
caaccgggtgacctgctcgacgccgtagccgccagcatcaagaacgtcaccggccgcgac
accaccccctcgaccagcggcggtacttccgatgggcgctttatcgctaccctgggcacc
caggtggtcgagcttggcccggtcaacgccaccattcaccagatcaacgaacgcgtgctg
gccagcgatctcgatctgctcaccgaggtttattaccagaccatggtgaaactcctcgca
tga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical substance (4)   
   KEGG COMPOUND (4)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (3)   
   Pfam (3)   
All databases (21)   

Download RDF
DBGET integrated database retrieval system