KEGG   Pseudomonas mendocina NK-01: MDS_3726
Entry
MDS_3726          CDS       T01473                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (SRP54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pmk  Pseudomonas mendocina NK-01
Pathway
pmk02024  Quorum sensing
pmk03060  Protein export
pmk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:pmk00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    MDS_3726
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    MDS_3726
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    MDS_3726
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pmk02044]
    MDS_3726
Enzymes [BR:pmk01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     MDS_3726
Secretion system [BR:pmk02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   MDS_3726
  Eukaryotic Sec-SRP protein
   MDS_3726
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA AAA_22 APS_kinase AAA_31 AAA_33 YqeC KTI12 AAA_30 Thymidylate_kin AAA_16 ParA AAA_24 Mg_chelatase HrpJ AAA_14 cobW nSTAND3 TsaE ResIII 6PF2K AAA_18 ArsA_ATPase
Other DBs
NCBI-ProteinID: AEB59757
Position
complement(4101816..4103195)
AA seq 459 aa
MFENLTDRLSQTLRNVTGKAKLTEDNIKDTLREVRMALLEADVALPVVKDFVGKVKERAV
GTEVSKSLTPGQAFVKIVRAELEELMGAANEDLALNAAPPAVVLMAGLQGAGKTTTAGKL
AKFLKERKKKSVLLVSADVYRPAAIKQLETLAGDLGVTFFPSDVSQKPVDIANAAIREAK
LKFIDVVILDTAGRLAVDTEMMAEIQALHAAVKPVETLFVVDAMTGQDAANTAKAFSDAL
PLTGVVLTKVDGDARGGAALSVRHITGKPIKFIGMGEKSDALEPFHPDRIASRILGMGDV
LSLIEQAEQTLDREKAEKLTKKLKKGKGFDLEDFRDQLQQMKNMGGLGGLMDKLPSIGGV
NLSQMGNAQGAAEKQFKQMEAIINSMTPAERRDPDIISGSRKRRIALGSGTQVQDIGRLI
KQHKQMQKMMKKFTAKGGMAKMMRGMGGMLPGGGGMPKF
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgttcgaaaatcttaccgatcgcctgtcccagacgctgcgtaacgtcacgggcaaggcc
aagctgaccgaagacaacatcaaggatacgctgcgcgaagtgcgcatggccctgctcgag
gccgacgtggctctgccggtggtcaaggacttcgtcggcaaggtcaaggagcgtgccgtc
ggcaccgaggtgtccaagagcctgactcctggccaggcgttcgtgaagatcgtccgcgcc
gagctggaagaactgatgggcgcggccaacgaagacctggcgctcaacgccgcgccgcct
gccgtcgtgctgatggcgggtttgcagggcgcgggcaagaccaccaccgccggcaagctg
gccaagttcctcaaggagcgtaagaagaaatcggtgctgctggtgtccgccgacgtctat
cgtccggcggcgatcaagcagctggaaaccctggcgggcgatctgggcgtcaccttcttc
ccttccgatgtcagtcagaagccggtggacatcgccaatgcggcgatccgcgaagccaag
ctgaagttcatcgacgtggtcatcctcgataccgccggccgtctggccgtggataccgag
atgatggccgagatccaggcgctgcacgcggcggtcaaaccggtggagacgctgttcgtg
gtcgacgccatgaccggtcaggacgccgccaacaccgccaaggcgttcagcgatgcgctg
ccgctcaccggtgtggtgctgaccaaggtcgacggtgacgcccgtggcggtgctgcgctg
tcggtgcgccacatcaccggcaagccgatcaagttcatcggtatgggcgagaagagcgac
gcgctcgagccgttccaccctgatcgtatcgcctcgcgcatcctcggcatgggcgacgtg
ctcagcctgatcgagcaggccgagcagaccctcgatcgcgaaaaggccgagaagctcacc
aagaagctgaagaagggcaagggcttcgacctcgaagacttccgcgaccagctgcagcag
atgaagaacatgggcggcctcggcggtctgatggacaagctgccgtccattggtggcgtc
aacctgtcgcagatgggcaacgctcagggcgcagccgagaaacagttcaagcagatggag
gcgatcatcaactcgatgacgccggccgagcgccgcgacccggacatcatcagtggctcg
cgcaagcgccgcatcgcgcttggctccggcacccaggtgcaggacatcggtcgtctgatc
aagcagcacaagcagatgcagaagatgatgaagaaattcaccgccaagggcggcatggcc
aagatgatgcgcggcatggggggcatgctccccggcggcggaggaatgccgaaattctga

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