KEGG   Pseudomonas mendocina NK-01: MDS_4103
Entry
MDS_4103          CDS       T01473                                 
Name
(GenBank) peptidoglycan glycosyltransferase
  KO
K05515  penicillin-binding protein 2 [EC:3.4.16.4]
Organism
pmk  Pseudomonas mendocina NK-01
Pathway
pmk00550  Peptidoglycan biosynthesis
pmk01100  Metabolic pathways
pmk01501  beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:pmk00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    MDS_4103
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01501 beta-Lactam resistance
    MDS_4103
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pmk01011]
    MDS_4103
Enzymes [BR:pmk01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.16  Serine-type carboxypeptidases
    3.4.16.4  serine-type D-Ala-D-Ala carboxypeptidase
     MDS_4103
Peptidoglycan biosynthesis and degradation proteins [BR:pmk01011]
 Peptidoglycan biosynthesis and degradation
  DD-Transpeptidase (Class B PBP)
   MDS_4103
SSDB
Motif
Pfam: Transpeptidase PBP_dimer
Other DBs
NCBI-ProteinID: AEB60134
Position
complement(4507216..4509108)
AA seq 630 aa
MPQPIRLKDHEKDARLVKRRVLVGGVVIILLTCVLIMRMYYLQVIQYEHHSTLAENNRIH
VQPLPPTRGLIYDRNGVIIADNRPSFSLTVTRERAGDWLSVLDTVVEVLELSEDERALFE
RRVRQGRRPFEPVPILFELSEEQIARIAVNQFRLPGVEVAAQLVRHYPQQEHFAHSVGYV
GRINEQELKRLDPTDYAGTHHIGKTGIERFYEDELHGEVGYEEVETNARGRVLRVLNRVD
PKPGKDIVLSLDVNLQEAAEKALGGRRGAVVAIDPNNGEVLAMVSQPSFDPNPFVTGISF
KAYGELRDSIDQPLYNRVLRGLYPPGSTIKPMVAVAGLDAGVVTPTSRVFDPGFYQLPNH
SHKYRNWNRSGDGWVDLNLAIARSNDTYFYDLAHKMGVDRMHDYMSRFGLGQRVALDMFE
ETAGLMPSRDWKRARYRQPWYPGETLILGIGQGYMQTTPLQLAQATALMATRGKWIRPHL
AKSVDGRLPVDPNPMPDIVLRDPKFWDYGIHGMEEVLHGPRGTARKVGDSSVYRIAGKSG
TAQVVAIKQGEKYDRNKVQERHRDHALFIGFAPANNPQIAVAVMVENGESGSGVAAPVVK
QVMDAWLLDKETGQLKAEFAMPKPAEVSQR
NT seq 1893 nt   +upstreamnt  +downstreamnt
atgccgcagccgattcgcctcaaggatcacgaaaaggacgctcgcctggtcaagcgccgg
gtgctcgtcggcggcgtggtgatcattctgctgacctgcgtgctgatcatgcgcatgtac
tacctgcaggtgatccagtacgagcatcacagcacgctggcagaaaacaaccgcatccac
gtgcagcctctgccgccaacgcgtgggctgatctacgaccgcaacggcgtgatcatcgcc
gacaaccgtcccagcttcagcctgaccgtgacccgtgagcgtgccggtgactggctcagc
gtgctcgacaccgtggtcgaggtgctggagcttagcgaggatgagcgtgcgctgttcgaa
cgccgcgtgcgccaggggcggcgcccgttcgagccggtaccgatcctgttcgagctgagc
gaggagcagatcgcccgcatcgcggtcaaccagttccgtctgccgggcgtcgaggtggct
gcgcaactggtgcggcattacccgcagcaggagcatttcgctcattcggtcggctatgtt
gggcgtatcaacgagcaggagctcaagcgcctcgacccgaccgactatgccggcacgcac
catatcggcaagaccggtatcgagcgcttctacgaggacgaactgcacggcgaggtcggc
tatgaagaggtcgagaccaacgcccgtggccgcgtattgcgcgtactcaaccgcgtcgat
ccgaaaccgggcaaggacatcgtcctcagcctcgacgtgaacctgcaggaagccgcggaa
aaagccctgggtggtcgtcgtggcgcggtggtggctatcgacccgaacaatggcgaagtg
ctggcgatggtcagccagcccagcttcgatcccaaccccttcgtcaccggcatcagcttc
aaggcctacggcgagttgcgcgactccatcgatcagccgctgtacaaccgggtactgcgc
ggcctttacccgcctggctcgaccatcaagccgatggtggccgtggctggcctcgatgcc
ggggtggtcacccccacctcgcgggtgttcgaccctggcttctatcagttgcccaaccac
agccacaaataccgcaactggaaccgtagcggtgacggctgggtcgacctcaacctggcc
atcgcccgttccaacgacacctatttctacgatctggcgcacaagatgggcgtcgatcgc
atgcacgactacatgagccgcttcggcctcggccagcgcgtggcgctggacatgttcgag
gaaaccgcgggcctgatgccgtcgcgcgactggaaacgggcacgctatcgccagccctgg
tatcccggcgagacgctgattctcggtatcggccagggctacatgcagaccacgccgctg
caactggcgcaggccaccgcattgatggccacgcgtggcaagtggattcgcccgcacctg
gccaagagcgtcgatggtcgtctgcccgtggaccccaatccgatgcccgacatcgtcctg
cgtgacccgaagttctgggattacggcatccatggcatggaagaggtgttgcatggccca
cgcggaaccgcgcgcaaggtcggcgacagttcggtctatcgcatcgctggcaagagcggc
acggcgcaggtggtggcgatcaagcagggcgagaagtacgaccgcaacaaggttcaggag
cgccaccgcgaccacgcgctgttcatcggttttgcgcctgcgaacaacccgcagatcgcc
gtcgcggtgatggtggagaacggggaatccggctctggcgtcgccgcgcccgtggtcaag
caggtcatggacgcctggctgctggacaaggaaaccggtcagctcaaggccgagttcgcg
atgcccaagcctgccgaggtcagtcaacgatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (2)   
   Pfam (2)   
All databases (13)   

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