KEGG   Pseudomonas mendocina NK-01: MDS_4448
Entry
MDS_4448          CDS       T01473                                 
Name
(GenBank) sarcosine oxidase alpha subunit family protein
  KO
K00302  sarcosine oxidase, subunit alpha [EC:1.5.3.24 1.5.3.1]
Organism
pmk  Pseudomonas mendocina NK-01
Pathway
pmk00260  Glycine, serine and threonine metabolism
pmk01100  Metabolic pathways
Module
pmk_M00975  Betaine degradation, bacteria, betaine => pyruvate
Brite
KEGG Orthology (KO) [BR:pmk00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    MDS_4448
Enzymes [BR:pmk01000]
 1. Oxidoreductases
  1.5  Acting on the CH-NH group of donors
   1.5.3  With oxygen as acceptor
    1.5.3.1  sarcosine oxidase (formaldehyde-forming)
     MDS_4448
    1.5.3.24  sarcosine oxidase (5,10-methylenetetrahydrofolate-forming)
     MDS_4448
SSDB
Motif
Pfam: GCV_T SO_alpha_A3 Fer2_4 GCV_T_C Pyr_redox_2 FAD_oxidored FAD_binding_2 DAO NAD_binding_8 HI0933_like GIDA Thi4 Pyr_redox_3 FAD_binding_3 AlaDh_PNT_C Lycopene_cycl SoxG
Other DBs
NCBI-ProteinID: AEB60479
Position
complement(4877832..4880849)
AA seq 1005 aa
MSQVNRLSNGGRIDRSQPLSFSFNGQTYQGYAGDTLASALLANGVDVIGRSFKYSRPRGI
VAAGAEEPNAVLQIGSSEAAQIPNVRATQQALYANLTATSTNGWPSVNTDLMGILGKVGG
GMMPPGFYYKTFMYPQNLWLTYEKYIRKAAGLGRSPKENDPDIYDYMNQHCDVLVVGAGP
AGLAAALAAGRSGARVILADEQEEFGGSLLSTREMLDGKPAAEWAAKAIAELQKMPEVTL
LPRATVNGYHDHNFLTIHQRLTDHLGEVAPMGQPRQRMHRVRAGRVVLATGAHERPLVYA
NNDVPGNMLADAVSTYVRRYGVAPGQKLVLSTNNDYAYRVVLDWLDAGRQVVAVADARSN
PRGSWVEEARRRGVRVLTGSAVVEARGSKRVTGARICAIDLAKHKVTSPGETVDCDLIVS
SGGYSPVVHLASHLGGRPIWREDILAFVPGEGFQKRHCAGAVNGVFGLGDSLADGFEAGA
KAAAEVGFKAVTGSLPKAEKRIEEASVALFQVPHDKGTSRAPKQFVDQQNDVTAAGIELA
TREGFESVEHVKRYTALGFGTDQGKLGNINGLAIAAKSMGISIAEMGTTMFRPNYTPVTF
GAIAGRHCGELFEPKRYTAMQKWHLENGAEFEDVGQWKRPWYFPKNGEDLHAAVARECLA
VRNAVGILDASTLGKIDIQGPDAREFLNRVYTNAWTKLDVGKARYGLMCKEDGMVFDDGV
TACLADNHFVMTTTTGGAGRVMEWLEIYHQTEWPELKVYFTSVTDHWATMTLSGPNSRKL
LAEVTDIDLDKDAFPFMSWKEGKVGGVPARVFRISFTGELSYEVNVQADYALGVWEKIIE
AGKKHGLTPYGTETMHVLRAEKGFIIVGQDTDGSVTPDDLGMGWCVGRTKPFSWIGWRGM
NREDCLKENRKQLIGLKPLDPNKVLPEGAQLVFDPKQSIPMTMVGHVTSSYMSSAMGYSF
AMALVRGGLSRIGERVFAPLADGSVIEAEIVSPVFYDPKGDRQNV
NT seq 3018 nt   +upstreamnt  +downstreamnt
atgagccaggtcaatcgtctttccaatggcggccgcatcgaccgcagccagcccctgagc
ttcagcttcaacggccagacctatcagggctacgccggcgacaccctggcttccgcgctg
ctggccaacggcgtcgacgtgatcggccgcagtttcaagtattcccgtccgcgcggcatc
gtcgctgccggtgccgaagagcccaatgccgtgctgcagatcggctccagcgaagcagcg
caaattcccaacgtgcgtgccacccagcaggcgctgtacgcgaacctgaccgccaccagc
accaatggctggccgagcgtcaacaccgacctgatgggcattctcggcaaggtcggcggc
ggcatgatgccgcccggtttctactacaagaccttcatgtacccgcagaacctctggctg
acctacgagaagtacattcgtaaggctgccggcctcggtcgttcgcccaaggaaaacgac
ccggacatctacgactacatgaaccagcactgcgacgtgctggtggtcggcgcaggccct
gccggcctggccgcggccctggccgccggtcgtagcggtgcgcgcgtgatcctcgctgac
gagcaggaagagttcggtggcagcctgctctccacccgcgagatgctcgacggcaagccg
gccgccgagtgggccgccaaggccatcgccgagctgcagaagatgccggaagtgactctg
ctgccgcgtgccacggtcaacggttaccacgaccacaacttcctcaccatccaccagcgt
ctcaccgaccacctcggcgaagtcgcgccgatgggccagccgcgtcagcgcatgcaccgt
gtacgtgccggtcgtgtggtcctggctaccggtgctcacgagcgtccgctggtgtacgcc
aacaacgacgtgcccggcaacatgctggccgatgccgtgtcgacctacgtacgccgttac
ggtgtagcgcccggccagaagctggtgctgtcgaccaacaacgattacgcctaccgcgtg
gtgctcgactggctcgacgccggtcgccaggtggtggccgtggccgacgcgcgcagcaac
ccgcgcggcagctgggtcgaagaagcgcgccggcgtggcgtgcgcgtactcaccggcagc
gccgtggtcgaggcgcgtgggagcaagcgcgtcaccggtgcgcgcatctgcgccatcgat
ctggccaagcacaaggtcaccagcccgggcgagaccgtcgactgcgacctgatcgtcagc
tccggcggctacagtccggtggtgcacctggcgtcgcacctgggcggccgtccgatctgg
cgtgaagacatcctcgccttcgtcccgggagaaggcttccagaagcgtcactgcgccggt
gccgtgaacggtgtgttcggtctcggcgacagcctcgccgatggtttcgaagccggcgcc
aaggcggctgccgaagtgggcttcaaggccgtcaccggcagcctgccgaaggccgagaag
cgcatcgaggaagcctcggtcgcgctgttccaggtgccgcacgacaagggcacctcgcgt
gcgccgaagcagttcgtcgaccagcagaacgacgtcactgccgccggtatcgagctggcc
acgcgtgaaggcttcgagtcggtcgagcacgtcaaacgctacaccgcactgggcttcggc
accgaccagggcaagctgggcaacatcaacggcctggccatcgccgccaagtcgatgggc
atcagcatcgccgagatgggcaccaccatgttccgcccgaactacactccggtgaccttc
ggcgccatcgccggccgtcactgcggcgagctgttcgagcccaagcgttacaccgccatg
cagaagtggcacctggagaacggtgccgagttcgaggacgtcggtcagtggaagcgtccc
tggtacttcccgaaaaacggcgaagacctgcacgccgccgtcgctcgtgagtgcctggcc
gtgcgtaacgcggtcggcatcctcgacgcctcgaccctgggcaagatcgacatccagggc
ccggatgcgcgcgagttcctcaaccgcgtgtacaccaacgcctggaccaagctggacgtg
ggcaaggctcgctacggcctgatgtgcaaggaagacggcatggtcttcgacgacggcgtc
accgcctgtctggccgacaaccatttcgtcatgaccaccaccaccggcggcgccgggcgc
gtgatggagtggctggagatttaccaccagaccgaatggccggagctgaaggtgtacttc
acctcggtcaccgaccactgggcgaccatgaccctgtccggccccaacagccgcaagctg
ctggccgaagtcaccgacatcgatctggacaaggacgccttcccgttcatgagctggaag
gaaggcaaggtcggcggcgtgccggcccgcgtgttccgcatctccttcaccggtgagctc
tcctacgaagtcaacgtgcaggccgactacgccctgggcgtgtgggagaagatcatcgag
gctggcaagaagcatggcctgacgccttacggcaccgagaccatgcacgtcttgcgcgcc
gagaagggcttcatcatcgtcggccaggacaccgacggttcggtcaccccggacgacctg
ggcatgggctggtgcgttggccgtaccaagccgttctcctggatcggctggcgcggcatg
aaccgtgaggactgcctgaaggaaaaccgcaagcagctgatcggcctcaaaccgctggac
ccgaacaaggtcctgccggagggcgcgcagctggtgttcgatcccaagcagtcgattccg
atgaccatggtcggtcacgtcacctcgagctacatgagttcggcgatgggttacagcttc
gccatggccctggtcagaggtggcctgtcgcgcatcggcgagcgcgtgttcgcgccgctg
gccgatggcagcgtgatcgaagccgaaatcgtcagccccgtgttctatgacccgaaaggg
gatcgccagaatgtctaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (2)   
   KEGG MODULE (1)   
Chemical substance (8)   
   KEGG COMPOUND (8)   
Chemical reaction (4)   
   KEGG ENZYME (2)   
   KEGG REACTION (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (17)   
   Pfam (17)   
All databases (38)   

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