KEGG   Prochlorococcus marinus subsp. pastoris CCMP1986: PMM1712
Entry
PMM1712           CDS       T00142                                 
Symbol
uvrA
Name
(GenBank) Excinuclease ABC, A subunit, ATP/GTP-binding site motif A (P-loop):ABC transporter
  KO
K03701  excinuclease ABC subunit A
Organism
pmm  Prochlorococcus marinus subsp. pastoris CCMP1986
Pathway
pmm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pmm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PMM1712 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmm03400]
    PMM1712 (uvrA)
DNA repair and recombination proteins [BR:pmm03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     PMM1712 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      PMM1712 (uvrA)
SSDB
Motif
Pfam: UvrA_inter UvrA_DNA-bind ABC_tran SMC_N AAA_16 AAA_29 RsgA_GTPase nSTAND1 nSTAND3 AAA_22 DnaJ_CXXCXGXG AAA_23 AAA_18 AAA_21 AAA_33 Viral_helicase1 NACHT ATPase MeaB cobW BCA_ABC_TP_C
Other DBs
NCBI-ProteinID: CAE20171
UniProt: Q7UZF5
Position
complement(1649575..1652475)
AA seq 966 aa
MVKKNIGINEDNSIKIRGARQHNLKNIDLTLPRNKFIVFTGVSGSGKSSLAFDTIFAEGQ
RRYVESLSAYARQFLGQVDKPDVDNIEGLSPAISIDQKSTSHNPRSTVGTVTEIQDYLRL
LFGRAGEPHCHHCGLPIAPQTIDEMVDQIVLLPEGTRYQLLAPVVRGKKGTHAKLLSGLA
AEGFARVRINGEVRELADSIELDKNHTHNIEVVVDRLIAREGIQERLNDSLQTCLKRGDG
LSIVEVVPKKGETLPPNLDKEKLYSENYACPIHGSIVEELSPRLFSFNSPYGACPDCHGI
GYLKKFTADRVIPDPSLPVYAAIAPWSEKDNTYYFSLLYSVGQAYGFELKTPWKDLSDLQ
KNVLLSGSDKPIVIQADSRFKGTSGFERPFEGILPILERQLTETNGESVKQKLEKYLELV
PCKTCSGKRLKPEALAVKIGPYSITDLTSISISETLFNIEKIMGLSKNIKENISLSEKQK
QIGELVLKEIRLRLKFLINVGLDYLTLDRPAMTLSGGEAQRIRLATQIGAGLTGVLYVLD
EPSIGLHQRDNDKLLETLKNLRDLGNTLVVVEHDEDTMKSADYLVDIGPGAGVYGGEIIA
KGSFEDVLNSKKSLTGAYLSGRKSIPTPKERRSSVKKSLILNNCVKNNLKDISVEFPLGR
LVSVTGVSGSGKSTLVNELLHPALSHSLGLKVPFPKGVKELKGIKAIDKVIVIDQSPIGR
TPRSNPATYTGAFDPIRQLFTATVEAKARGYQAGQFSFNVKGGRCEACRGQGVNVIEMNF
LPDVYVQCDVCKGARFNRETLQVKYKGFNISDVLEMTVEQAAETFSAIPQAADRLSTLVD
VGLGYVKLGQPAPTLSGGEAQRVKLATELSKRATGKTLYLIDEPTTGLSFYDVHKLMDVI
QRLVDKGNSVVVIEHNLDVIRCSDWIIDLGPDGGDKGGEVIVEGTPEDVAKHPISYTAKY
LKEALN
NT seq 2901 nt   +upstreamnt  +downstreamnt
atggttaaaaaaaatataggtattaatgaagataattcaattaagattcgaggcgctcga
caacataatttaaagaatatagatctaactcttccaagaaataaatttattgtttttaca
ggtgttagtggaagtggtaagagctctttggcttttgatactatttttgctgaaggacag
aggagatatgtagaaagtctttctgcttatgcaagacaatttttaggtcaagttgataaa
ccagatgtagataatattgagggcttatcccctgctatatccatagatcaaaaatcaacg
agccataatcctcgatcaactgttggaactgtaactgagatacaagattatttaagatta
ttatttggtcgagccggagaaccccattgtcaccactgtggtctacctattgctccgcag
acaattgatgagatggttgatcaaatagttttgctgcccgaaggaacaagatatcaatta
cttgcacctgttgtgaggggtaaaaaaggaactcatgcaaaattacttagtggattagca
gcagaaggctttgctcgagtaagaattaatggtgaggtaagggaacttgcagatagtatt
gaactagacaaaaaccatactcataatattgaggtagtagttgatcgattgattgcgaga
gagggaattcaggaaagattgaatgactctttacaaacttgccttaaaagaggggatgga
ctctctatcgtagaagttgttccaaaaaaaggcgaaactctacctccgaatctagataaa
gaaaagttatattcagagaattatgcatgtccaattcatggatctattgtcgaagagttg
tctccaagactattttcttttaacagtccctacggtgcctgccctgattgccatggtatt
ggatatttaaaaaaatttactgcagatagagtaatacctgacccttctttacctgtttat
gctgccatagctccttggagtgaaaaagataatacttattatttttcattactttattca
gttggccaagcttatggttttgaattaaaaacaccatggaaagatttgagtgatttacaa
aaaaatgttttactttctggttctgataagccaatcgtaattcaagctgatagtcgtttt
aagggtactagtggtttcgaaagaccttttgaaggaatcttgcctattttagaaaggcaa
ttaaccgaaactaatggagaatcagtcaagcaaaagcttgaaaaatatttagaattagtc
ccttgtaaaacatgttctggtaaaagattaaaaccagaagcacttgccgttaagattggg
ccttacagtattactgatttgacctctataagtatctcagaaactttatttaatatcgag
aaaataatggggttaagtaaaaatataaaagaaaatatttctttatccgagaaacaaaaa
caaataggtgaactagttttaaaagaaattcgcctgcgtttaaagtttcttattaatgtc
ggtttagattatttaactttagatagaccagcaatgactttatcaggaggagaagcacaa
cgtataagattagcaactcaaattggagctggcttaactggtgttttatatgtattggat
gaacctagtattggtttacaccaaagagataatgataaattactggaaactttaaaaaat
ctcagagatttgggaaatactcttgttgttgttgaacatgatgaagatactatgaaatca
gctgattacttagtggatattggaccaggtgcaggagtttatggaggggaaattattgca
aaaggttcatttgaagatgttttaaattcaaagaagtcattaactggagcatatctcagt
ggaagaaaatcgattcctactcctaaagaacgtagatcttcagtcaagaaaagtttaatt
ttaaataactgcgttaaaaataatttaaaagatatatcagttgaatttcctttgggcaga
ttagtttccgtaaccggagtgagtggaagtggaaaaagtacattagttaatgaattatta
catcctgcgcttagtcattctcttggtttaaaagtacctttccctaaaggtgttaaagag
ttaaaagggataaaagctatagataaggtaattgttattgatcaatctcctattggaaga
actcctagatcaaaccctgcaacttatacaggggcttttgatccaattagacagttattt
actgcgactgtagaagctaaagccagaggttatcaagctgggcaattcagctttaatgta
aaaggaggtagatgtgaagcttgtcgaggacaaggagtaaatgtaattgaaatgaatttt
ttacccgatgtctatgttcaatgcgatgtatgtaagggagctcgttttaatagagaaact
cttcaagttaaatacaaaggctttaatatttctgatgttttagaaatgactgttgagcag
gctgcagaaactttttccgcgatccctcaagcagctgatagattatctacattagttgat
gtaggtcttggttacgtgaagttgggccagccagctccaacactatctggcggcgaagca
caaagagtaaaattagcaactgaattatctaaaagagctactggaaaaactttatattta
attgatgagccaacaactgggttaagcttttatgatgttcataaattaatggatgttatt
caacgtttagtagataaaggtaattccgtagttgtcattgagcataatttggacgttatt
agatgttcagactggataattgatcttggacctgatggaggtgataaaggtggagaagtt
atagttgagggtacacctgaagatgttgcgaagcatccaataagttatacagctaaatat
ttaaaagaagctttaaattaa

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (21)   
   Pfam (21)   
All databases (29)   

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