KEGG   Prochlorococcus marinus NATL2A: PMN2A_1207
Entry
PMN2A_1207        CDS       T00267                                 
Name
(GenBank) type II alternative RNA polymerase sigma factor, sigma-70 family
  KO
K03087  RNA polymerase nonessential primary-like sigma factor
Organism
pmn  Prochlorococcus marinus NATL2A
Brite
KEGG Orthology (KO) [BR:pmn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmn03021]
    PMN2A_1207
Transcription machinery [BR:pmn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     PMN2A_1207
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r3 Sigma70_r4 Sigma70_r1_2 Sigma70_r4_2 HTH_53
Other DBs
NCBI-ProteinID: AAZ58697
UniProt: Q46II1
Position
complement(1694576..1695583)
AA seq 335 aa
MTTAVEAPKTKNSSSAASARSVTDIDLVRSYLRDIGRVPLLSHEQEITLGRQVQDLVSLE
NLETELESDLGEKPDINFFADKAGISPIQLKKKLKSGRRAKERMVAANLRLVVSVAKKYT
KRNMELLDLIQEGTIGLVRGVEKFDPTRGYKFSTYAYWWIRQGITRAIAEKSRSIRLPIH
ITEMLNKLKKGQRELSQELSRTPTLKELSEYVELPETDVKDLMSRAGQPVSLETKIGDGE
DTILLDLLSNEIDMPSEQIESDCMKGDLETLLEQLPELQNRVLRMRYGIDGDDPMSLTGI
GRVLGISRDRVRNLERDGLRGLRKTGDSVEAYMAS
NT seq 1008 nt   +upstreamnt  +downstreamnt
atgacaacggcagtagaggctcctaagactaagaattcatcttccgctgcttctgcaaga
tccgttacggatattgacttagttcgttcttacttaagagatattggaagagtccctttg
ctgtcacacgagcaggaaattactttgggaagacaagttcaagatcttgtttcccttgaa
aatcttgagaccgaactcgagagcgatttaggggaaaagccagacatcaactttttcgct
gacaaagctggaatctctccgatccaattaaaaaagaagttaaagagcggaagaagagca
aaagagagaatggttgcagccaatcttcgtttggtagtaagtgttgctaagaaatacaca
aaaagaaatatggaattattagatttaattcaagaaggaactatcggcttagttcgggga
gttgaaaaatttgatcctactcgtggatacaagttttcaacctatgcctactggtggata
cgtcaaggcatcacacgcgcaattgctgaaaaaagtagatctataagactgcctatacac
ataactgaaatgctaaacaagttgaaaaaaggtcaacgagaattaagtcaagaactttct
agaactccaaccttgaaagaactatctgagtatgttgagttgccagagactgacgttaaa
gatttaatgagtagagctgggcagccagttagcttagaaacaaaaattggcgatggtgaa
gatactattttattagacttattatctaacgaaattgatatgccctccgaacaaattgaa
agtgattgcatgaagggtgatttagaaacattactcgaacaattacccgaattacaaaat
cgtgttttaagaatgagatacggtatagatggtgatgatccgatgagtcttactggtatt
ggaagagttttgggtattagtagagatagagtaagaaatttagaaagagacggtttgcga
ggtttaagaaaaaccggagactcagttgaagcttatatggcttcttga

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