KEGG   Pseudomonas monteilii SB3078: X969_06580
Entry
X969_06580        CDS       T02972                                 
Name
(GenBank) topoisomerase I
  KO
K03168  DNA topoisomerase I [EC:5.6.2.1]
Organism
pmon  Pseudomonas monteilii SB3078
Brite
KEGG Orthology (KO) [BR:pmon00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pmon03032]
    X969_06580
   03400 DNA repair and recombination proteins [BR:pmon03400]
    X969_06580
Enzymes [BR:pmon01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.1  DNA topoisomerase
     X969_06580
DNA replication proteins [BR:pmon03032]
 Prokaryotic type
  DNA Topoisomerases
   X969_06580
DNA repair and recombination proteins [BR:pmon03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      X969_06580
SSDB
Motif
Pfam: Topoisom_bac Topo_Zn_Ribbon TOP1_ZnF Toprim zf-C4_Topoisom Zn_ribbon_recom Toprim_4
Other DBs
NCBI-ProteinID: AHC81650
Position
1407581..1410190
AA seq 869 aa
MGKSLVIVESPAKAKTINKYLGNQYVVKSSIGHIRDLPTSGSASASKEPAAKRGKAAGEA
PALSPKEKARRQLVARMGVDPDHGWKAKYEILPGKEKVIEELRRLAKDADTIYLATDLDR
EGEAIAWHLREAIGGDDTRYKRVVFNEITKKAIQEAFSQPGELDIDRVNAQQARRFLDRV
VGYMVSPLLWAKIARGLSAGRVQSVAVKLVVEREREIRAFIPEEYWEIHADLGTAKNAKV
RFEVAREKGEAFKPLNEAQAMAALEKLKASSYSVVKREDRPTSSKPSAPFITSTLQQAAS
NRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSADALDMARSYIEREFGKQYLPEAPLV
YGSKEGAQEAHEAIRPSDVNTHPSKLSGMERDAERLYELIWRQFLACQMPPAQYLSTSVT
VAAGDFELRAKGRILKFDGYTRVLPQQSKPGEDDVLPEMVQGEALKLIQIDPSQHFTKPP
ARFTEASLVKEMEKRGIGRPSTYAAIISTIQDRGYVTLHNRRFYSEKMGDIVTERLSESF
SNLMDYGFTADMEENLDDVAQGERDWKNVLDEFYGDFSKKLQTAESNEDGMRANQPTMTN
IPCKECGRPMMIRTASTGVFLGCSGYSLPPKERCKATVNLVPGDEIAADDEGESESRVLL
GKHRCPICATAMDAYLLDEKHKLHICGNNPDCAGYEIEEGNYRIKGYEGPSLECDKCGSE
MQLKTGRFGKFFGCTNPACKNTRKLLKSGEAAPPKMDKVDMPELKCEKVDDTYVLRDGAS
GLFLAASQFPKNRETRAPLVLEIVPHKHEIDPKYHFLCDAPQKDPEGRPAVIRYSRKTKE
QYVQSEVDGKPTGWKAFYDGNAWKVEDKR
NT seq 2610 nt   +upstreamnt  +downstreamnt
atgggcaaatcgctggtcattgtggaatccccggccaaggccaagaccatcaacaagtac
ctgggcaaccagtacgtggtgaagtcgagtatcggccatatccgagacctccccaccagc
ggttcggccagcgccagcaaagagccagccgccaagcgtggcaaggccgcgggtgaggct
ccggccctgtcgccgaaggaaaaggcccgccgccagctggtggcacgcatgggcgtcgac
cccgaccacggctggaaggccaagtacgagatcctgcctggcaaggaaaaggtgatcgaa
gagctgcgccgcctggcgaaggatgccgacaccatctatctcgcaaccgacttggaccgc
gaaggggaagccattgcctggcacctgcgcgaggccatcggcggcgacgacacccgctac
aagcgcgtggtgttcaacgaaatcaccaagaaggccatccaggaagccttctcgcagccg
ggcgagctggatatcgaccgggtcaacgcgcagcaggcgcggcgtttcctcgaccgcgtg
gtcggctacatggtttcgccgctgctgtgggccaagatcgcacgtggcctgtccgccggc
cgtgtacagtcggtggcggtgaagctggtggtggagcgcgagcgtgaaatccgcgcgttc
atcccggaagagtactgggaaatccacgccgacctcggcaccgccaagaacgccaaggtg
cgtttcgaagtggcccgcgagaagggtgaggccttcaagccgctgaacgaagcccaggcc
atggccgcgctggagaagctcaaggcttccagctacagcgtggtcaagcgcgaagaccgc
ccgaccagcagcaagccttcggcaccgttcattacctccaccttgcagcaggccgccagc
aaccgcctgggcttcggtgtgaagaaaaccatgatgatggcccagcgcttgtacgaagcc
ggctacatcacctacatgcgtaccgactcgaccaacctgtcggccgacgccctggatatg
gcgcgcagctacatcgagcgcgagttcggcaagcagtacctgcccgaggcaccgctggtg
tacggcagcaaggaaggcgcccaggaggcgcacgaagcgattcgtccttccgacgtaaac
acccacccgagcaagctcagtggcatggagcgtgacgccgagcgcctgtatgagctgatc
tggcgccagttcctggcctgccagatgccgccggcgcaatacctgtccaccagcgtcacc
gtggctgcaggcgacttcgagttgcgtgccaagggccgtatcctcaagttcgacggttac
acccgtgtgctgccgcaacagagcaagcctggcgaagacgacgtgttgccggaaatggtc
cagggcgaagcgctgaagctgatccagatcgacccgagccagcacttcaccaagccaccg
gcgcgcttcaccgaagccagcctggtcaaggaaatggaaaagcgtggcatcggtcgcccg
tcgacctatgcggcgatcatttcgaccattcaggaccgtggctatgtgactctgcacaac
cgccgcttctattccgagaagatgggcgacatcgtcaccgagcgcctgtccgaaagcttc
tccaacctgatggactacggctttaccgccgacatggaagagaacctcgacgacgtggcc
cagggcgagcgtgactggaagaacgtgctcgacgagttctacggcgatttcagcaagaag
ctgcagactgccgagtccaacgaagacggcatgcgtgccaaccagccgaccatgaccaac
attccgtgcaaggaatgtggccggccgatgatgatccgcaccgcttccaccggcgtgttc
ctcggttgctcgggctacagcctgccgccgaaagagcgctgcaaggccaccgtcaacctg
gtgccgggcgacgagattgccgccgacgacgagggcgaatcggaatcccgcgtgttgctg
ggcaagcaccgctgcccgatctgcgccacggcgatggatgcctacctgctggacgagaag
cacaagctgcacatctgcggtaacaacccggattgcgctggctacgagatcgaggaaggc
aactaccgcatcaagggttacgaagggccgagcctggagtgcgacaagtgtggcagcgag
atgcagttgaagactggccgcttcggcaagttcttcggttgcaccaacccggcgtgcaag
aacactcgcaaactgctcaagagcggcgaggcggcgccaccgaagatggacaaggtggac
atgccagagctcaagtgcgagaaggtcgacgatacctacgtgctgcgtgatggcgcttcg
gggctgttcctggcagccagccagttccccaagaatcgcgaaacccgtgcaccgctggtg
ctggaaatcgttccacacaaacacgagattgatccgaagtaccacttcctgtgcgatgcg
ccgcagaaagacccggaaggccgccctgcagtgatccgctacagccgcaagaccaaggag
cagtacgtgcagtccgaggttgatggcaagccgaccggctggaaggcgttctacgacggc
aatgcgtggaaggttgaagacaagcgctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein domain (7)   
   Pfam (7)   
All databases (16)   

Download RDF
DBGET integrated database retrieval system