KEGG   Pseudomonas soli: O165_003255
Entry
O165_003255       CDS       T03276                                 
Name
(GenBank) excinuclease ABC subunit A
  KO
K03701  excinuclease ABC subunit A
Organism
pmos  Pseudomonas soli
Pathway
pmos03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pmos00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    O165_003255
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pmos03400]
    O165_003255
DNA repair and recombination proteins [BR:pmos03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     O165_003255
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      O165_003255
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind DnaJ_CXXCXGXG nSTAND1 AAA_29 AAA_21 AAA_16 RsgA_GTPase DUF4350
Other DBs
NCBI-ProteinID: AIN57366
UniProt: A0AA86F3G8
Position
651454..654105
AA seq 883 aa
MPNNSFGESSCTAAASGMVEVRGARENNLKEVDVSIPRNALVVFSGVSGSGKSSLAFGTI
YAEAQRRYFESVAPYARRLIDQAGVPDVDAIDGLPPAVALQQQRGSSNARSSVGSVTTLS
SLVRMMYSRAGAYPANQPMLYAEDFSPNTPQGACPTCHGLGHVYEVTEAIMVPDPSLSIR
ERAIASWPPAWQGQNLRDILVSMGYDVDRPWKDLPKKDRDWILFTEETPTVPVYAGFTPA
ETRVALKRKMEPSYMGTFTGARRYVLHTFANTQSALMRKRVSRFMEGKPCPTCHGKRLKP
EALSVTFAGVDIGAFMQMPLDQLAALLEPIAQGDFRAHAAGEATDKEATRRDRAERAASG
RAVHAVSPDVRRTSALSEEKRLAAQRLAGGVMARLRQLRGLGLGYLTLDRATPTLSAGEL
QRLRLATQLSSLLFGVVYVLDEPSAGLHPSDSQALYDALDRLRDAGNSVFVVEHDLDLMR
RAQWLVDVGPDAGERGGRVLYSGEPDGLRKIAESRTARYLFDEIAAPGSRAREATGWLEL
QGIHRHNLHGVDARIPLGVLTAVTGISGSGKSSLVAQALPELVLLHLGHEPEDDAAESAT
SEGPAVIEATGGHLAGDVDAIQRLVQVDQKPIGRTPRSNLATYTGLFDHVRKLFAATPDA
RRRRYDAGRFSFNVAKGRCETCEGEGFVSVELLFMPSVYAPCPTCHGARYNEATLKVRWN
GRNIAEVLQMTVDEASEFFAGEDAVARPLQLLRDIGLGYLRLGQPATELSGGEAQRIKLA
TELQRSQRGRSLYVLDEPTTGLHASDADRLLVQLQRLVDAGNTVVMIEHDMRAVAQADWV
IDVGPGAGAAGGSIVVAGSPQQVARTSGSRTAPFLAQELARAE
NT seq 2652 nt   +upstreamnt  +downstreamnt
atgccaaacaattctttcggtgaatcctcttgtacggctgcggccagcggcatggtggaa
gtgcgcggcgcgcgcgagaacaacctcaaagaggtggacgtttccatcccgcgtaacgcg
ctggtggtgttctccggcgtttccggctccggcaagtcctcgctggccttcggcaccatc
tacgccgaggcgcagcggcgctacttcgagtcggtggccccctatgcgcggcgcctgatc
gaccaggccggcgtgccggacgtcgatgcgatcgacggcctgccgccggcggtggcgttg
caacagcagcggggctccagcaacgcgcgttcctccgtgggcagtgtgaccaccctgtcc
agcctggtgcggatgatgtattcgcgcgccggcgcctacccagccaaccagccgatgctg
tacgccgaggatttttcgcccaacacgccgcagggagcgtgcccgacctgccacggcctg
ggccatgtgtacgaggtgaccgaggccatcatggtgcccgatccctccctgagcatccgc
gagcgggcgatcgcctcctggccccccgcctggcaaggccagaacctgcgcgacatcctg
gtcagcatgggctacgacgttgaccgaccgtggaaggacctgccgaagaaggatcgcgac
tggattctgttcaccgaggaaacaccgacagtgccggtgtacgccggcttcacgcccgcc
gaaactcgcgtcgcgctcaagcgcaagatggagccgagctacatgggcaccttcaccggc
gcccggcggtatgtgctgcacacctttgccaatacccaaagcgcactgatgagaaagcgc
gtgtcccggttcatggagggcaagccgtgccccacctgccacggcaagcggctcaagccc
gaggcgctgtcggtcactttcgccggcgtggacatcggcgcgttcatgcagatgccgctg
gaccagttggctgccttgctcgaacccattgcccagggcgatttccgcgcccatgcagcg
ggggaggctacggacaaggaagcgacccgacgcgaccgtgccgaacgcgcggcctccggc
cgtgccgtccatgcggtatcgcccgacgtgcgccgcacctccgcgctgtcggaagaaaag
cgcctcgccgcgcagcgcctggccggcggtgtgatggcgcgcctgcgtcaactgcgtggg
ctgggcctgggttacctgacgctggaccgggccacgccgacgctttcggccggcgagttg
cagcgcctgcggctggccacgcaattgagttccctgctgttcggtgttgtgtacgtgctc
gacgagccctcggcggggttgcacccctccgacagccaggcgctgtacgacgcgctcgac
cggctgcgtgacgccggcaactcggtgttcgtggtcgagcacgacctggacctgatgcgc
cgcgcgcaatggctggtggatgtggggccggatgccggggagcgtggcggccgcgtgctc
tacagcggcgagccggacggcctgcgcaagattgccgaatcgcgcaccgcccgctatctg
ttcgacgaaatcgccgcgccgggaagccgggcacgcgaagcgaccggctggctggagctt
cagggcattcatcgtcacaacctgcatggcgtggacgcacgcattccgctgggcgtgctg
acggccgtcaccggcatctccggctcgggcaagtccagcctcgtcgcgcaggcgctgccg
gagctggtgctactgcacttgggccacgagcccgaggacgacgcggccgaaagcgccacc
agcgaagggccggcagtgatcgaagcgactggcggtcatctggcgggcgacgtggacgcc
atacagcgcctggtgcaggtggaccagaagccgatcgggcgcacgccccggtccaacctg
gccacctacaccggcctgttcgaccacgtgcgcaagctgttcgccgccacgcccgatgcg
cgacgccgccgctatgacgccgggcgcttctcgttcaacgtggctaaggggcgttgcgag
acctgcgagggcgagggcttcgtcagtgtggagttgctgttcatgcccagcgtgtacgcc
ccgtgtccgacgtgccatggcgcacgctacaacgaggccacgctgaaggtgcgatggaac
gggcgcaacatcgccgaggtgctgcagatgaccgtggacgaagccagcgaattctttgcg
ggtgaagacgccgtggcccggcccctgcaattgctgcgcgatatcggattgggctatctg
cgcctggggcaaccggccacggaactttccggtggcgaggcgcagcgcatcaagctggcg
accgagcttcagcgcagccagcgcggccgaagcctgtacgtgctcgacgagccaaccacc
gggctgcatgcatcggatgccgaccggctgctggtgcagttgcagcgcctggtcgatgcc
ggcaacaccgtggtgatgatcgagcacgatatgcgcgcggtggctcaggccgattgggtg
atcgacgtggggcctggtgcaggcgctgccggcggcagcatcgtggtggcgggctcccct
cagcaggtggcccgaacgtctggcagccgaaccgctccgttccttgcgcaggagttggcg
cgggccgagtag

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (9)   
   Pfam (9)   
All databases (17)   

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