KEGG   Pseudomonas soli: O165_004735
Entry
O165_004735       CDS       T03276                                 
Name
(GenBank) RNA polymerase sigma factor
  KO
K03088  RNA polymerase sigma-70 factor, ECF subfamily
Organism
pmos  Pseudomonas soli
Brite
KEGG Orthology (KO) [BR:pmos00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pmos03021]
    O165_004735
Transcription machinery [BR:pmos03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     O165_004735
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_r4 HTH_23 HTH_38 Sigma70_ECF
Other DBs
NCBI-ProteinID: AIN57645
UniProt: A0A1H9ELR5
Position
980583..981131
AA seq 182 aa
MNASVTPLDFQRCLEACALGDRRALQALYDQEGARLLGVARRIVRDDATAEDIVHDAFIR
IWTRAASFDPARGSARGWIYSITRHLALNAIRDSRRETVLDDADIDSSAALPAGGDDIDL
WSGSAKIYRCLEQLQPTPQRCILHAYVDGCSHAEIAGLLGAPLGTVKAWIKRSLKALREC
LE
NT seq 549 nt   +upstreamnt  +downstreamnt
ttgaatgcgtctgtcacccctttggacttccaacgctgcctggaggcgtgtgcactgggc
gaccggcgagccctgcaggcactctacgatcaggaaggtgcgcgcctgctcggcgttgcc
cggcgcatcgtgcgtgacgatgccaccgccgaggacatcgtccacgatgcgttcatccgc
atctggacccgtgctgccagctttgacccggcgcgtggctcggctcgcggctggatctac
agcatcactcgccatctggcgctcaatgcaatacgcgacagtcgccgtgaaaccgtgctg
gacgacgccgacatcgatagctcggcagcattgccggcagggggcgatgacattgacctc
tggtcaggctcggcaaaaatctaccgttgcctcgaacaattgcagcccacgccacagcgc
tgcatcttgcacgcctatgtggacggctgcagccacgccgaaatagccggcctgctgggt
gcgccgttaggcaccgtcaaggcttggatcaagcgcagcctgaaggcgctgcgggagtgc
ctggaatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (6)   
   Pfam (6)   
All databases (13)   

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