KEGG   Paenibacillus mucilaginosus 3016: PM3016_6562
Entry
PM3016_6562       CDS       T01757                                 
Name
(GenBank) peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin
  KO
K07260  zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]
Organism
pmq  Paenibacillus mucilaginosus 3016
Pathway
pmq00550  Peptidoglycan biosynthesis
pmq01100  Metabolic pathways
pmq01502  Vancomycin resistance
pmq02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pmq00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    PM3016_6562
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    PM3016_6562
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01502 Vancomycin resistance
    PM3016_6562
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pmq01002]
    PM3016_6562
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pmq01011]
    PM3016_6562
  09183 Protein families: signaling and cellular processes
   01504 Antimicrobial resistance genes [BR:pmq01504]
    PM3016_6562
Enzymes [BR:pmq01000]
 3. Hydrolases
  3.4  Acting on peptide bonds (peptidases)
   3.4.17  Metallocarboxypeptidases
    3.4.17.14  zinc D-Ala-D-Ala carboxypeptidase
     PM3016_6562
Peptidases and inhibitors [BR:pmq01002]
 Metallo peptidases
  Family M15: zinc D-Ala-D-Ala carboxypeptidase family
   PM3016_6562
Peptidoglycan biosynthesis and degradation proteins [BR:pmq01011]
 Peptidoglycan biosynthesis and degradation
  Carboxypeptidase
   PM3016_6562
Antimicrobial resistance genes [BR:pmq01504]
 Gene sets
  Vancomycin resistance modules
   Vancomycin resistance, D-Ala-D-Lac type [MD:M00651]
    PM3016_6562
SSDB
Motif
Pfam: VanY DUF1244
Other DBs
NCBI-ProteinID: AFC33185
UniProt: H6NKP8
Position
7736624..7737511
AA seq 295 aa
MPILHHRTRRHWSAALLLCTMLAASGCVNPAGQSTAPPPVPGSTEPAQKSPSEGTAKPPS
QPAADPAGKTPGTGSAAKPDTGAKDQPAPAEKPPAVQVAAEPASIAVLVNKTNKLPENYR
PADLVDPKIPFIFEEKLEKRKIRKEAAEPLEKLFAAAEKAGLPLSGVSAYRSHETQKTLY
TNYVLKDGEEAANKYSAKPGHSEHETGLAIDVTSRSGKCAASDCFGATKEAAWLASHSHE
FGFIIRYPKGKESITGYQYEPWHLRYVGQEAASAITKGGLTLEEYLSGAAPVSKP
NT seq 888 nt   +upstreamnt  +downstreamnt
atgcctatcctgcatcatagaacgcgcagacactggtcagccgcactgctgctctgcacg
atgctcgccgcatccggctgcgtgaaccctgccgggcagtccaccgctccgccccctgtc
cccggaagcacagaaccggcacagaaatcaccttcggaaggaacggcgaagcccccgtca
cagcccgcagcggaccctgccgggaagacgcccggcacaggctctgcagccaagccggac
accggcgctaaagatcagcccgcccctgcggagaaaccgccggccgtccaggtcgccgcg
gagcccgcttccatcgcggtgctcgtcaacaaaacgaacaaactgccggagaactaccgt
ccggcggatctcgtagacccgaagattccgttcatcttcgaggagaagctcgagaagcgc
aagatccgcaaggaagccgcggagccgctcgagaagctgttcgccgcggccgagaaagcg
ggtctgccgctgtccggcgtatcggcctaccgttcgcatgaaacgcagaagacactgtat
accaactatgtgctgaaagacggcgaagaagccgcaaacaagtacagcgcgaagccgggt
cacagcgagcacgagacgggcctggcgatcgacgtcacgagccgcagcggcaagtgtgcc
gcaagcgactgcttcggggcgacgaaggaagccgcctggctggcgtcgcactcccacgag
ttcggcttcatcatccgctatccgaagggcaaggaatcgatcacgggctaccaatacgag
ccgtggcacctgcggtacgtcgggcaggaagctgcctccgccattaccaagggcggcctg
acgctggaggaatacctaagcggcgccgcgccggtctccaagccgtaa

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Ontology (5)   
   KEGG BRITE (5)   
Pathway (5)   
   KEGG PATHWAY (4)   
   KEGG MODULE (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (18)   

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