KEGG   Paenibacillus mucilaginosus KNP414: KNP414_04069
Entry
KNP414_04069      CDS       T01550                                 
Name
(GenBank) UDP-N-acetylmuramyl-tripeptide synthetase
  KO
K01928  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:6.3.2.13]
Organism
pms  Paenibacillus mucilaginosus KNP414
Pathway
pms00300  Lysine biosynthesis
pms00550  Peptidoglycan biosynthesis
pms01100  Metabolic pathways
Brite
KEGG Orthology (KO) [BR:pms00001]
 09100 Metabolism
  09105 Amino acid metabolism
   00300 Lysine biosynthesis
    KNP414_04069
  09107 Glycan biosynthesis and metabolism
   00550 Peptidoglycan biosynthesis
    KNP414_04069
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:pms01011]
    KNP414_04069
Enzymes [BR:pms01000]
 6. Ligases
  6.3  Forming carbon-nitrogen bonds
   6.3.2  Acid-D-amino-acid ligases (peptide synthases)
    6.3.2.13  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
     KNP414_04069
Peptidoglycan biosynthesis and degradation proteins [BR:pms01011]
 Precursor biosynthesis
  Amino acid ligase
   KNP414_04069
SSDB
Motif
Pfam: Mur_ligase_M Mur_ligase_C Mur_ligase MoCF_biosynth LpxD
Other DBs
NCBI-ProteinID: AEI42602
UniProt: F8FDN7
Position
complement(4213939..4215429)
AA seq 496 aa
MQLKELAKQLAVSRILGRAETEVKGLQTDSRKVVPGDLFICIPGLVADGHDYAAAAARRG
AAALVAERELDAGVPVLLVKDARHAMAVLANHFYGYPSRELKLIGVTGTNGKTTTTYLLD
RVLSDAGYRTGLMGNIHIKIGGEYLPNHATNTQEALELQKILRQMADAGTDYCLMEVSSH
GLEMGRVKGCLFRSGIFTNLTQDHLDFHGTMERYQAAKGLLFSRLGNDYGADPAQRRFAV
LNGDEEASSDYARLTAAETIVYGIDNPKADVRAEGIEMTAQGTRFQCVTYRGTAEIRTRL
VGRFNVYNVLGVIAAALAEGLELEGIAASLAGIASVEGRMEVVDAGQPFLVLVDYAHTPD
GLENALSTVSQFAEGSIYCVFGCGGDRDRAKRPLMGGVAAKYSDYIYVTSDNPRTENPEA
ILQDIVPGIEQAGLDPASYELIADRKEAIRRAVERAQPGDIVLIAGKGHETYQDIGGVKH
PFDDRLVAKEAVMGRA
NT seq 1491 nt   +upstreamnt  +downstreamnt
atgcagctgaaagaactggcaaagcagctggccgtcagccggatcctcggcagggcagag
actgaagtcaaggggctgcagactgactcccgcaaggtagtacctggcgatttgttcatc
tgcattccgggattggtcgccgacggccacgattatgccgccgccgccgcccgccggggg
gcggccgccctggtggcggaaagggagctggacgccggcgtgccggtgcttctggtgaag
gacgcccgccatgcgatggcggtgcttgccaatcacttttacggctatccgagccgggag
ctgaagctcatcggcgtaacgggaacgaacgggaagacgacgacgacctacctgctcgac
cgcgttctgagcgatgcggggtaccgtacgggcctgatgggcaacatccacatcaagatc
ggcggcgagtatctgccgaaccatgcgacgaatacccaggaagcgctggagctgcagaag
attctgcggcagatggcggatgccgggaccgattactgtctgatggaggtatcctcgcac
ggcctcgagatgggccgggtgaagggatgcctattccggtcgggcatttttaccaatttg
acccaggatcacctggacttccacgggacgatggagcgctatcaggccgccaagggcctg
ctgttctcccgcctgggcaacgactacggagcggatccggcacagcgccggttcgccgtg
ctgaacggggacgaggaagcctcctcggactacgcgaggctgacggcggctgagacgatc
gtctacgggatcgacaacccgaaggcggatgtgcgggccgaaggcattgaaatgacggcg
cagggcacccggttccagtgtgtgacctaccgggggacggcggagatccggacgcgtctg
gtcggacgatttaacgtgtataacgtgctgggcgtcattgccgccgccctggcggagggg
ctcgagctcgaaggcatcgccgcaagcctcgccgggatcgcctcggtggaaggccgcatg
gaagtggtggacgccggccagccgttcctggtgctggtggattacgcccatacgccggac
ggcctggagaacgcgctgtccacggtctcgcagtttgccgaaggaagcatctactgcgtg
ttcggctgcgggggagaccgggaccgcgcgaagcgtccgctgatgggcggcgtggcggcc
aagtacagcgactacatctacgtgacttcggataacccgcggacggagaatccggaggcg
atcctgcaggacattgtgccggggatcgagcaggcgggtctggacccggcgagctacgag
ctcatcgcggaccggaaggaagcgatccgccgtgcggtggagagagcgcagccgggcgat
atcgtgctcatcgccggcaaggggcacgagacgtatcaggacatcggcggggtcaaacat
ccgttcgatgaccggctggtggccaaggaagccgtcatgggcagggcatga

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (3)   
   KEGG PATHWAY (3)   
Chemical substance (6)   
   KEGG COMPOUND (6)   
Chemical reaction (2)   
   KEGG ENZYME (1)   
   KEGG REACTION (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (5)   
   Pfam (5)   
All databases (24)   

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