KEGG   Paenibacillus mucilaginosus KNP414: KNP414_07500
Entry
KNP414_07500      CDS       T01550                                 
Symbol
rpoA
Name
(GenBank) RpoA
  KO
K03040  DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]
Organism
pms  Paenibacillus mucilaginosus KNP414
Pathway
pms03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:pms00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    KNP414_07500 (rpoA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pms03021]
    KNP414_07500 (rpoA)
   03400 DNA repair and recombination proteins [BR:pms03400]
    KNP414_07500 (rpoA)
Enzymes [BR:pms01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     KNP414_07500 (rpoA)
Transcription machinery [BR:pms03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     KNP414_07500 (rpoA)
DNA repair and recombination proteins [BR:pms03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      KNP414_07500 (rpoA)
SSDB
Motif
Pfam: RNA_pol_A_bac RNA_pol_A_CTD RNA_pol_L PASTA HHH_5 RAD51D_N zf-ZPR1
Other DBs
NCBI-ProteinID: AEI45994
UniProt: F8F7I5
Position
complement(8204314..8205258)
AA seq 314 aa
MIEIEKPKIETVSLSEDGSYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTIPGVMEDVTEIILNLKGLSLKIHSDEEKVLEIDAEGEGAVVAGDIRGDSDVEI
LNPDLHIATLSSDSRLHMRIHANRGRGYVSADKNKKEDQPIGVIPIDSIYTPITRVNYSV
ENTRVGQVTNYDKLTLEVWSDGSIRPEEAVSLGAKILTEHLMLFVGLTDEAKDAEIMVEK
EEDKKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELITKTEEDMMKVRNLGRKSLEEVQ
EKLEELGLGLRMED
NT seq 945 nt   +upstreamnt  +downstreamnt
ttgatcgaaatcgaaaagccgaaaatagaaaccgtatcattgagtgaagacggctcttat
ggcaagtttgttgtagagcccctcgaaagaggctacggaactacgctcggtaactcgctt
cgcagaattttactttcgtccctgcccggagctgctgtaacctccgtgcagatcgatggg
gttctgcacgagttctccacgattccaggggtcatggaagatgttacggagattatcctg
aacctgaagggcttgtcgctcaagatccactccgatgaggagaaggttcttgagatcgat
gccgagggtgaaggggctgttgtggctggcgatattcgcggtgatagcgatgtggaaatt
cttaatccggatttgcacatcgcaaccctatcctccgactcccgtcttcacatgagaatt
catgcgaaccgcggccggggatatgtatcggcagacaagaacaaaaaagaggatcagccg
atcggcgtgattccgatcgattcgatctacactccgattacgcgtgtcaattacagcgtg
gagaacacccgcgtcggtcaagtgacgaactacgacaagctgactctcgaagtctggtcg
gatggcagcattcgtcctgaagaggctgtgagcttgggcgccaagatcttgactgagcat
ctgatgctgtttgtcggtctgactgacgaagccaaggatgccgagatcatggtagagaag
gaagaagacaagaaggaaaaggtcctcgagatgacgatcgaggaactggatctgtctgtt
cgttcctacaactgtctgaagcgtgcgggaatcaacacggttcaggaattgattacaaaa
acggaagaagatatgatgaaggttcgcaacttgggacgcaaatctctcgaagaagtacaa
gagaagctcgaggagcttggtcttggcctccggatggaagactag

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (1)   
   KEGG PATHWAY (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (3)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (7)   
   Pfam (7)   
All databases (18)   

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